RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 RFPL3O75679 317 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 POP4O95707 220 aaKnown RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 IGSF6O95976 241 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 GSRP00390 522 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 XPAP23025 273 aaPredicted RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 EPHA8P29322 1005 aaPredicted RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 L1CAMP32004 1257 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 DRD3P35462 400 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 RABIFP47224 123 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 DNA2P51530 1060 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 JAM2P57087 298 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 HNRNPKP61978 463 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 APBA1Q02410 837 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 SCAPQ12770 1279 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 CNTN1Q12860 1018 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 PTK2BQ14289 1009 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 CDO1Q16878 200 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 AGBL4Q5VU57 503 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 OR2A12Q8NGT7 310 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 BTN2A2Q8WVV5 523 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 RXFP2Q8WXD0 754 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 ASB12Q8WXK4 309 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 CNDP2Q96KP4 475 aaKnown RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 BPIFA3Q9BQP9 254 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 CNPY3Q9BT09 278 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 MRPL47Q9HD33 250 aaKnown RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 PARVAQ9NVD7 372 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 IPO11Q9UI26 975 aaKnown RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 NOCTQ9UK39 431 aaKnown RBP13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 HS3ST3A1Q9Y663 406 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 CACNA1EQ15878 2313 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 C2CD4BA6NLJ0 364 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 C1QTNF9BB2RNN3 333 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 FPGTO14772 594 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 C1QTNF9P0C862 333 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 PNMA6AP0CW24 399 aaPredicted RBP13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 ZNF143P52747 638 aaPredicted RBP13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 ELP6Q0PNE2 266 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 INO80DQ53TQ3 878 aaPredicted RBP13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 PSTKQ8IV42 348 aaKnown RBP13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 CACTIN-AS1Q8N1I8 211 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 OR2AP1Q8NGE2 309 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 HCAR2Q8TDS4 363 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 FAM172AQ8WUF8 416 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 MYEOVQ96EZ4 313 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 CAMK1GQ96NX5 476 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 MTG2Q9H4K7 406 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 IL21RQ9HBE5 538 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 KLHL11Q9NVR0 708 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 SERGEFQ9UGK8 458 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 BZW2Q9Y6E2 419 aaKnown RBP13.11□□□□□ -0.31
SNORD88B-201ENST00000408454 A0A1W2PQ67 120 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 A0A1W2PQU0 124 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 RTN2O75298 545 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 CNTN5O94779 1100 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 MYBL1P10243 752 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 ATP1A3P13637 1013 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 JUPP14923 745 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 CKMT2P17540 419 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 EPHB2P29323 1055 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 RPIAP49247 311 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 BLKP51451 505 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 DAB2P98082 770 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 FMO1Q01740 532 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 ACAP1Q15027 740 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 ALFQ53S48 1182 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 PROSER1Q86XN7 944 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 BBS5Q8N3I7 341 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 WDR48Q8TAF3 677 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 GRIN3AQ8TCU5 1115 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 SAP25Q8TEE9 199 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 CENPIQ92674 756 aaPredicted RBP13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 AGPAT1Q99943 283 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 KCTD5Q9NXV2 234 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 MPP6Q9NZW5 540 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 LCMT1Q9UIC8 334 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 SIK3Q9Y2K2 1263 aa13.1□□□□□ -0.31
SNORD88B-201ENST00000408454 SPTBN2O15020 2390 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 COL5A1P20908 1838 aaPredicted RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 A0A1W2PR77 199 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 DAPK3O43293 454 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 LEFTY1O75610 366 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 DKK1O94907 266 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 THEGLP0DJG4 465 aa13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
SNORD88B-201ENST00000408454 KRT10P13645 584 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms