RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
NUP50-203ENST00000407019 ITGB1P05556 798 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 NCF2P19878 526 aaPredicted RBP17.1■□□□□ 0.33
NUP50-203ENST00000407019 CDC25CP30307 473 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 ABL2P42684 1182 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 ACTR3P61158 418 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 BLMHQ13867 455 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 POU6F1Q14863 301 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 UGP2Q16851 508 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 TIGD7Q6NT04 549 aaPredicted RBP17.1■□□□□ 0.33
NUP50-203ENST00000407019 EPGNQ6UW88 154 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 ZYG11AQ6WRX3 759 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 LCA5Q86VQ0 697 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 TRIB2Q92519 343 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 CASP10Q92851 521 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 MIEF2Q96C03 454 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 CMTM5Q96DZ9 223 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 ZNF419Q96HQ0 510 aaPredicted RBP17.1■□□□□ 0.33
NUP50-203ENST00000407019 FAM167BQ9BTA0 163 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 GATA5Q9BWX5 397 aaPredicted RBP17.1■□□□□ 0.33
NUP50-203ENST00000407019 C1QTNF1Q9BXJ1 281 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 ACE2Q9BYF1 805 aaPredicted RBP17.1■□□□□ 0.33
NUP50-203ENST00000407019 COG4Q9H9E3 785 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 OXSMQ9NWU1 459 aa17.1■□□□□ 0.33
NUP50-203ENST00000407019 CPSF2Q9P2I0 782 aaKnown RBP17.1■□□□□ 0.33
NUP50-203ENST00000407019 TNFRSF10BO14763 440 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 SKIP12755 728 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 SAT1P21673 171 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 SLC25A3Q00325 362 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 CRHR2Q13324 411 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 FSCBQ5H9T9 825 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 CCDC117Q8IWD4 279 aaPredicted RBP17.09■□□□□ 0.33
NUP50-203ENST00000407019 CNTN4Q8IWV2 1026 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 TDRD5Q8NAT2 981 aaKnown RBP17.09■□□□□ 0.33
NUP50-203ENST00000407019 PPFIBP2Q8ND30 876 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 NUP205Q92621 2012 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 A0A088AWK7 358 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 PHGDHO43175 533 aaKnown RBP17.09■□□□□ 0.33
NUP50-203ENST00000407019 PRKAA2P54646 552 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 NKX3-2P78367 333 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 YWHAHQ04917 246 aaPredicted RBP17.09■□□□□ 0.33
NUP50-203ENST00000407019 SLC12A1Q13621 1099 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 DENND5AQ6IQ26 1287 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 POTEHQ6S545 545 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 SCD5Q86SK9 330 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 MYLK4Q86YV6 388 aaPredicted RBP17.09■□□□□ 0.33
NUP50-203ENST00000407019 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
NUP50-203ENST00000407019 GPAMQ9HCL2 828 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 ENTPD7Q9NQZ7 604 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 WASF2Q9Y6W5 498 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 NLRC5Q86WI3 1866 aa17.09■□□□□ 0.33
NUP50-203ENST00000407019 TDRD15B5MCY1 1934 aaKnown RBP17.09■□□□□ 0.33
NUP50-203ENST00000407019 F8W810 466 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 TK2O00142 265 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 SEPT4O43236 478 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 ADAMTS4O75173 837 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 NEBLO76041 1014 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 MOCS2O96007 188 aaPredicted RBP17.08■□□□□ 0.33
NUP50-203ENST00000407019 AHSGP02765 367 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 HLA-DQB2P05538 268 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 ASGR1P07306 291 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 GABRB3P28472 473 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 PRDX6P30041 224 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 PGFP49763 221 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 TUBP50607 506 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 ARTNQ5T4W7 220 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 LIPMQ5VYY2 423 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 SLC41A1Q8IVJ1 513 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 RTL3Q8N8U3 475 aaKnown RBP17.08■□□□□ 0.33
NUP50-203ENST00000407019 SCG3Q8WXD2 468 aaKnown RBP17.08■□□□□ 0.33
NUP50-203ENST00000407019 SCYL1Q96KG9 808 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 FSD1LQ9BXM9 530 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 ILKAPQ9H0C8 392 aaPredicted RBP17.08■□□□□ 0.33
NUP50-203ENST00000407019 MRM3Q9HC36 420 aaKnown RBP17.08■□□□□ 0.33
NUP50-203ENST00000407019 NDFIP2Q9NV92 336 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 RBM22Q9NW64 420 aaKnown RBP eCLIP17.08■□□□□ 0.33
NUP50-203ENST00000407019 TCAF1Q9Y4C2 921 aa17.08■□□□□ 0.33
NUP50-203ENST00000407019 PTPRDP23468 1912 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 E9PAM4 449 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 CABYRO75952 493 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 VAPBO95292 243 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
NUP50-203ENST00000407019 SLC35E2BP0CK96 405 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 COL6A2P12110 1019 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 DNAJB1P25685 340 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 ADRA1AP35348 466 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 AVPR1AP37288 418 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 POLD2P49005 469 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 AP2B1P63010 937 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 SLC9B1Q4ZJI4 515 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 METTL21CQ5VZV1 264 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 AFMIDQ63HM1 303 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 ANO7Q6IWH7 933 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
NUP50-203ENST00000407019 KCTD4Q8WVF5 259 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 SERPINB11Q96P15 392 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 NMUR1Q9HB89 426 aa17.08■□□□□ 0.32
NUP50-203ENST00000407019 RUVBL2Q9Y230 463 aaKnown RBP17.08■□□□□ 0.32
NUP50-203ENST00000407019 RAP2CQ9Y3L5 183 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms