RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 FAM35AQ86V20 835 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 DSELQ8IZU8 1212 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 FBXW8Q8N3Y1 598 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 ACMSDQ8TDX5 336 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 SH3GL3Q99963 347 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 ARHGEF38Q9NXL2 777 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 NOD1Q9Y239 953 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 FAM95CA0A1B0GW59 222 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 F8W8V4 182 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 NIPAL4Q0D2K0 466 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 CDH17Q12864 832 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 PDK3Q15120 406 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 DUSP28Q4G0W2 176 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 GNASQ5JWF2 1037 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 NAPEPLDQ6IQ20 393 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 PRPF18Q99633 342 aaKnown RBP12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 PCDHAC1Q9H158 963 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 TRPC7Q9HCX4 862 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 CRTAC1Q9NQ79 661 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 ABI2Q9NYB9 513 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 RRN3P2A6NIE6 340 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 AURKAO14965 403 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 CRCPO75575 148 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 STAMBPO95630 424 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 AHSGP02765 367 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 AOC1P19801 751 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 CCL14Q16627 93 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 AMIGO2Q86SJ2 522 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 SATL1Q86VE3 508 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 CRYBG2Q8N1P7 616 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 NPLOC4Q8TAT6 608 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 B3GALT6Q96L58 329 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 MLPHQ9BV36 600 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 GRIP2Q9C0E4 1043 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 ABHD16BQ9H3Z7 469 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 POMKQ9H5K3 350 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 WDR41Q9HAD4 459 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 HDAC3O15379 428 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 DDHD2O94830 711 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 PNPLA4P41247 253 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 ANO4Q32M45 955 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 SLC39A3Q9BRY0 314 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 SNX13Q9Y5W8 968 aa12.86□□□□□ -0.35
PPP4R1-202ENST00000400555 CCDC189A1A4V9 331 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 KCNU1A8MYU2 1149 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 DAB1O75553 588 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 THP07101 528 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 MLNP12872 115 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 CPOXP36551 454 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 COG7P83436 770 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 PAOXQ6QHF9 649 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 CXCL17Q6UXB2 119 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 NPY6RQ99463 290 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 SMOQ99835 787 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 SSC5DA1L4H1 1573 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 UBA6A0AVT1 1052 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 LIN7AO14910 233 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 CD68P34810 354 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 TAS2R39P59534 338 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 ITGA7Q13683 1181 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 DBN1Q16643 649 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 MAP3K21Q5TCX8 1036 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 KIAA0319Q5VV43 1072 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 CLEC6AQ6EIG7 209 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 DDIASQ8IXT1 998 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 PPHLN1Q8NEY8 458 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 DNAJC1Q96KC8 554 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 PRG3Q9Y2Y8 225 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 GOLGA4Q13439 2230 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 I6L893 689 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 SCAMP3O14828 347 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 DNAJA2O60884 412 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 GSRP00390 522 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 DAOAP59103 153 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 PTK2BQ14289 1009 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 RARS2Q5T160 578 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 OR52E8Q6IFG1 317 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 TAC4Q86UU9 113 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 CEP70Q8NHQ1 597 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 NFKBIZQ9BYH8 718 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 ADAMTS10Q9H324 1103 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 DSEQ9UL01 958 aa12.85□□□□□ -0.35
PPP4R1-202ENST00000400555 OR51F1A6NGY5 319 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 NCF1BA6NI72 391 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 NCF1CA8MVU1 366 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 KIF3CO14782 793 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 NCF1P14598 390 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 MAGEA3P43357 314 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 GRIK3Q13003 919 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 MYLPFQ96A32 169 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 OLFM3Q96PB7 478 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms