RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SEL1L3Q68CR1 1132 aa26■■□□□ 1.75
COL13A1-203ENST00000398969 SNX32Q86XE0 403 aa26■■□□□ 1.75
COL13A1-203ENST00000398969 CRTAC1Q9NQ79 661 aa26■■□□□ 1.75
COL13A1-203ENST00000398969 DDIT4Q9NX09 232 aa26■■□□□ 1.75
COL13A1-203ENST00000398969 UBP1Q9NZI7 540 aa26■■□□□ 1.75
COL13A1-203ENST00000398969 TLK1Q9UKI8 766 aa26■■□□□ 1.75
COL13A1-203ENST00000398969 TBC1D30Q9Y2I9 924 aa26■■□□□ 1.75
COL13A1-203ENST00000398969 NCAM1P13591 858 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 IGFBP6P24592 240 aaPredicted RBP25.99■■□□□ 1.75
COL13A1-203ENST00000398969 LIN52Q52LA3 116 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 MAP3K21Q5TCX8 1036 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 GPRIN1Q7Z2K8 1008 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 ZC3HC1Q86WB0 502 aaKnown RBP25.99■■□□□ 1.75
COL13A1-203ENST00000398969 ARHGAP18Q8N392 663 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 PPP1R36Q96LQ0 422 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 TEKT5Q96M29 485 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 VAT1Q99536 393 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 PACSIN3Q9UKS6 424 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 RGSL1A5PLK6 1076 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 EPHA3P29320 983 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 MMEL1Q495T6 779 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 ARL13AQ5H913 290 aaPredicted RBP25.99■■□□□ 1.75
COL13A1-203ENST00000398969 SMG8Q8ND04 991 aaKnown RBP25.99■■□□□ 1.75
COL13A1-203ENST00000398969 PGAP3Q96FM1 320 aaPredicted RBP25.99■■□□□ 1.75
COL13A1-203ENST00000398969 APBA2Q99767 749 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 SNX10Q9Y5X0 201 aa25.99■■□□□ 1.75
COL13A1-203ENST00000398969 PHGDHO43175 533 aaKnown RBP25.98■■□□□ 1.75
COL13A1-203ENST00000398969 GRID2O43424 1007 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 PIGNO95427 931 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 SAT1P21673 171 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 LRPAP1P30533 357 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 RGS2P41220 211 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 HK2P52789 917 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 PGGT1BP53609 377 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 RPL26P61254 145 aaKnown RBP25.98■■□□□ 1.75
COL13A1-203ENST00000398969 CDH17Q12864 832 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 GRM2Q14416 872 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 ARL13BQ3SXY8 428 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 OGFRL1Q5TC84 451 aaPredicted RBP25.98■■□□□ 1.75
COL13A1-203ENST00000398969 C16orf89Q6UX73 402 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 CTU1Q7Z7A3 348 aaKnown RBP25.98■■□□□ 1.75
COL13A1-203ENST00000398969 KYQ8NBH2 561 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 SMOQ99835 787 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 CENPKQ9BS16 269 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 RHOJQ9H4E5 214 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 CABYRO75952 493 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 RP9Q8TA86 221 aaKnown RBP25.98■■□□□ 1.75
COL13A1-203ENST00000398969 DPF3Q92784 378 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 COLEC11Q9BWP8 271 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 SPATA16Q9BXB7 569 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 ZFYVE28Q9HCC9 887 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 CNGB3Q9NQW8 809 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 NSMCE4AQ9NXX6 385 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 PSMD13Q9UNM6 376 aa25.98■■□□□ 1.75
COL13A1-203ENST00000398969 CCDC78A2IDD5 438 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 JCHAINP01591 159 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 USP17L7P0C7H9 530 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 PRKAA2P54646 552 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 USP10Q14694 798 aaKnown RBP25.97■■□□□ 1.75
COL13A1-203ENST00000398969 CNPY1Q3B7I2 92 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 GRAMD1BQ3KR37 738 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 NAPEPLDQ6IQ20 393 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 DSELQ8IZU8 1212 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 CPSF7Q8N684 471 aaKnown RBP25.97■■□□□ 1.75
COL13A1-203ENST00000398969 ZSCAN18Q8TBC5 510 aaPredicted RBP25.97■■□□□ 1.75
COL13A1-203ENST00000398969 TSNARE1Q96NA8 513 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 BTBD9Q96Q07 612 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 SERPINI1Q99574 410 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 KIFC1Q9BW19 673 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 NUF2Q9BZD4 464 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 ZNF385DQ9H6B1 395 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 G3BP2Q9UN86 482 aaKnown RBP25.97■■□□□ 1.75
COL13A1-203ENST00000398969 INPP5FQ9Y2H2 1132 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 PTGESO14684 152 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 AP1G2O75843 785 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 TFEBP19484 476 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 GLRBP48167 497 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 PRKAA1Q13131 559 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 RASIP1Q5U651 963 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 TMC7Q7Z402 723 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 SDCCAG8Q86SQ7 713 aaPredicted RBP25.97■■□□□ 1.75
COL13A1-203ENST00000398969 PQLC1Q8N2U9 271 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 ZMIZ2Q8NF64 920 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 ZDHHC2Q9UIJ5 367 aa25.97■■□□□ 1.75
COL13A1-203ENST00000398969 SHROOM3Q8TF72 1996 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 SLC22A2O15244 555 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 SLC35E2BP0CK96 405 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 GSTT1P30711 240 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 PPARGP37231 505 aaPredicted RBP25.96■■□□□ 1.75
COL13A1-203ENST00000398969 ALDH1A3P47895 512 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 NAGLUP54802 743 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 PPP2R5DQ14738 602 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 FAM35AQ86V20 835 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 ICA1LQ8NDH6 482 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 STYXQ8WUJ0 223 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 KCTD4Q8WVF5 259 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 SCYL1Q96KG9 808 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 EPAS1Q99814 870 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 TMEM30AQ9NV96 361 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 C6orf203Q9P0P8 240 aaPredicted RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms