RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HPDLQ96IR7 371 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 GPR20Q99678 358 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ELOVL4Q9GZR5 314 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 S100A14Q9HCY8 104 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 VTA1Q9NP79 307 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 COPG2Q9UBF2 871 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 RAB26Q9ULW5 256 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KCNH4Q9UQ05 1017 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 RIPK3Q9Y572 518 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 SLC1A6P48664 564 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 GDF10P55107 478 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TUBA4AP68366 448 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PAFAH1B3Q15102 231 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 DEPDC1Q5TB30 811 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 GRTP1Q5TC63 336 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 NAPEPLDQ6IQ20 393 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 LLGL2Q6P1M3 1020 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF534Q76KX8 674 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 LINC00523Q86TU6 105 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 OR8H2Q8N162 312 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ZBTB45Q96K62 511 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 SNRNP25Q9BV90 132 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC106Q9BWC9 280 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 REXO4Q9GZR2 422 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 RHOJQ9H4E5 214 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF277Q9NRM2 450 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PTCH2Q9Y6C5 1203 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 MYH11P35749 1972 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 A0A087WXM4 84 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CAPN8A6NHC0 703 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 S100A1P23297 94 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PSMB9P28065 219 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ST13P50502 369 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 RAD23AP54725 363 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CARTPTQ16568 116 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 N4BP2L1Q5TBK1 243 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 DENND5BQ6ZUT9 1274 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CDH24Q86UP0 819 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TICAM1Q8IUC6 712 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PQLC1Q8N2U9 271 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KHSRPQ92945 711 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ILKAPQ9H0C8 392 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 MTMR10Q9NXD2 777 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 SCN3BQ9NY72 215 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PIM2Q9P1W9 311 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 MYH4Q9Y623 1939 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 RBM47A0AV96 593 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 HMX2A2RU54 273 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 RRN3P2A6NIE6 340 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PARNO95453 639 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 MPOP05164 745 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 YBX3P16989 372 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 WNT7BP56706 349 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TUBB3Q13509 450 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TSTA3Q13630 321 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KCNT1Q5JUK3 1230 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KCNT2Q6UVM3 1135 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KDELC2Q7Z4H8 507 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ZBTB8BQ8NAP8 495 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM150BA6NC51 233 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 GSRP00390 522 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ETS1P14921 441 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ALOX12P18054 663 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 RBL1P28749 1068 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 HMGCS2P54868 508 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TTLL4Q14679 1199 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM132DQ14C87 1099 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 OGFRL1Q5TC84 451 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ATG14Q6ZNE5 492 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF467Q7Z7K2 595 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 SULF1Q8IWU6 871 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ADGRF2Q8IZF7 708 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 FBXW8Q8N3Y1 598 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ELMO3Q96BJ8 720 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 DCUN1D1Q96GG9 259 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 AGAP3Q96P47 875 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ASB2Q96Q27 587 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 DEPDC7Q96QD5 511 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 DGCR6LQ9BY27 220 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF696Q9H7X3 374 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 SLC39A10Q9ULF5 831 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ARFGEF1Q9Y6D6 1849 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PAPSS1O43252 624 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 SNX2O60749 519 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PIAS1O75925 651 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 GLDCP23378 1020 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 GNL1P36915 607 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ARPP19P56211 112 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 NME3Q13232 169 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 MPP3Q13368 585 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TTC7BQ86TV6 843 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 PCYOX1LQ8NBM8 494 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 COX4I2Q96KJ9 171 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TUBGCP5Q96RT8 1024 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 NPY6RQ99463 290 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TIMMDC1Q9NPL8 285 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 ARHGEF4Q9NR80 690 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TSPAN16Q9UKR8 245 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms