RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 A0A0G2JND7 137 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 GMNCA6NCL1 334 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 MSH3P20585 1137 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 SSTR1P30872 391 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 MTHFRP42898 656 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 CAP1Q01518 475 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 OCRLQ01968 901 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 SLC12A1Q13621 1099 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 CA9Q16790 459 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 HSP90AA5PQ58FG0 334 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 GRTP1Q5TC63 336 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 ZNF470Q6ECI4 717 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 FAM171BQ6P995 826 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 STK40Q8N2I9 435 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 EPS8L3Q8TE67 593 aaKnown RBP8.4□□□□□ -1.06
PTPRD-204ENST00000397606 WFIKKN2Q8TEU8 576 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 TBX21Q9UL17 535 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 TMEM120BA0PK00 339 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 C5orf60A6NFR6 353 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 GJA1P17302 382 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 NCF2P19878 526 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-204ENST00000397606 IL1R2P27930 398 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 AFF1P51825 1210 aaKnown RBP8.4□□□□□ -1.06
PTPRD-204ENST00000397606 DSC1Q08554 894 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 XKR4Q5GH76 650 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 NEPROQ6NW34 567 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 FBXL22Q6P050 247 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 SETD3Q86TU7 594 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-204ENST00000397606 SH2D3CQ8N5H7 860 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 OR7D4Q8NG98 312 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 CXorf40AQ8TE69 158 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 ART4Q93070 314 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 ACDQ96AP0 544 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 ZBTB18Q99592 522 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 CENPKQ9BS16 269 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 LMAN2LQ9H0V9 348 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 SUN2Q9UH99 717 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 TMEM59LQ9UK28 342 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 TRIM33Q9UPN9 1127 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 MRPS17Q9Y2R5 130 aaKnown RBP8.4□□□□□ -1.06
PTPRD-204ENST00000397606 PCDHB9Q9Y5E1 797 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 SNX10Q9Y5X0 201 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 PDE4DIPQ5VU43 2346 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 SUPT3HB4E1H0 165 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 SUPT3HO75486 399 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 CNPP09543 421 aaKnown RBP8.4□□□□□ -1.07
PTPRD-204ENST00000397606 MNAT1P51948 309 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 CACUL1Q86Y37 369 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 MYO1HQ8N1T3 1032 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 WDTC1Q8N5D0 677 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 NETO2Q8NC67 525 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 SNX19Q92543 992 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 CHMP6Q96FZ7 201 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 CPNE1Q99829 537 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 ELAC2Q9BQ52 826 aaKnown RBP8.4□□□□□ -1.07
PTPRD-204ENST00000397606 DTLQ9NZJ0 730 aa8.4□□□□□ -1.07
PTPRD-204ENST00000397606 ARIH1Q9Y4X5 557 aaPredicted RBP8.4□□□□□ -1.07
PTPRD-204ENST00000397606 DCTN3O75935 186 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 BEST1O76090 585 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 PTPN7P35236 360 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 OGDHQ02218 1023 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 RING1Q06587 406 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 STX3Q13277 289 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 RCN2Q14257 317 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TEAD2Q15562 447 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 SETMARQ53H47 684 aaPredicted RBP8.39□□□□□ -1.07
PTPRD-204ENST00000397606 FSCBQ5H9T9 825 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TCEAL8Q8IYN2 117 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 LRRN4CLQ8ND94 238 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 CFAP61Q8NHU2 1237 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 BPIFB1Q8TDL5 484 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 AENQ8WTP8 325 aaKnown RBP8.39□□□□□ -1.07
PTPRD-204ENST00000397606 SKA1Q96BD8 255 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 CCDC126Q96EE4 140 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 HMCESQ96FZ2 354 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 SLC2A13Q96QE2 648 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 CDCA3Q99618 268 aaPredicted RBP8.39□□□□□ -1.07
PTPRD-204ENST00000397606 FUT8Q9BYC5 575 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 GPAMQ9HCL2 828 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TMPRSS4Q9NRS4 437 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 APPL1Q9UKG1 709 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TCRBV7S2A1N4TA0A589 114 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TRIM16O95361 564 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 ASLP04424 464 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 MLNP12872 115 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TPSB2P20231 275 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 KCNQ1P51787 676 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 AP1S1P61966 158 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 RFTN1Q14699 578 aaPredicted RBP8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TPSAB1Q15661 275 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 RBBP7Q16576 425 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 OTUB2Q96DC9 234 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 SLC25A51Q9H1U9 297 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 ILVBLA1L0T0 632 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 GCATO75600 419 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 TMCC1O94876 653 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 RHOP08100 348 aa8.39□□□□□ -1.07
PTPRD-204ENST00000397606 CHN1P15882 459 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms