RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FNDC11Q9BVV2 318 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 PLEKHA1Q9HB21 404 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TMEM39AQ9NV64 488 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 A0A087WZ62 844 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 BUD23O43709 281 aaKnown RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 MGAT5Q09328 741 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 CUL2Q13617 745 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 SPERTQ8NA61 448 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 CKAP2Q8WWK9 683 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 SLC28A2O43868 658 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 RAMP2O60895 175 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 MATN4O95460 622 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 IGSF6O95976 241 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 RPA3P35244 121 aaPredicted RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 RFC5P40937 340 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 RXRGP48443 463 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 CNSTQ6PJW8 725 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 RXFP2Q8WXD0 754 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TBC1D13Q9NVG8 400 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 MYMKA6NI61 221 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 MDM4O15151 490 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 OGTO15294 1046 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TSPAN8P19075 237 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 ABCG1P45844 678 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TUBP50607 506 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 CRY2Q49AN0 593 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TFDP3Q5H9I0 405 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 FAM171A1Q5VUB5 890 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 ZNF470Q6ECI4 717 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 IRGCQ6NXR0 463 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 BHLHE22Q8NFJ8 381 aaPredicted RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 OR2L8Q8NGY9 312 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 ACE2Q9BYF1 805 aaPredicted RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 BRINP2Q9C0B6 783 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 CDH9Q9ULB4 789 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 CASKO14936 926 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 MGAT1P26572 445 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 MRPS22P82650 360 aaKnown RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 CHAF1BQ13112 559 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 HYIQ5T013 277 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 POP1Q99575 1024 aaKnown RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 CKLFQ9UBR5 152 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 PACSIN3Q9UKS6 424 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 NT5C2P49902 561 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 IRAK1P51617 712 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 TIMM50Q3ZCQ8 353 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 JAZF1Q86VZ6 243 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 CCDC36Q8IYA8 594 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 VANGL1Q8TAA9 524 aaPredicted RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 TRAPPC9Q96Q05 1148 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 CHIAQ9BZP6 476 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 TBC1D30Q9Y2I9 924 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 MROH7Q68CQ1 1323 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 VAPBO95292 243 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 ATF4P18848 351 aaPredicted RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 SCTRP47872 440 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 TBX4P57082 545 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 KCNMB4Q86W47 210 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 FMR1NBQ8N0W7 255 aaPredicted RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 POF1BQ8WVV4 589 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 TNFAIP8O95379 198 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SRCP12931 536 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 TSPAN5P62079 268 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 CCNG2Q16589 344 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 PLA2G4EQ3MJ16 856 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 PAGE2BQ5JRK9 111 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 BHLHB9Q6PI77 547 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 PYDC1Q8WXC3 89 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 C11orf24Q96F05 449 aaPredicted RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 NECTIN3Q9NQS3 549 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 NUP50Q9UKX7 468 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMU1-201ENST00000397149 UHRF1BP1Q6BDS2 1440 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 FBXO21O94952 628 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 CSN2P05814 226 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SLC26A3P40879 764 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 UGT2B15P54855 530 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 PTPN20Q4JDL3 420 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 DENND5AQ6IQ26 1287 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 ZNF280DQ6N043 979 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 GALNT7Q86SF2 657 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SNX32Q86XE0 403 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 FEM1CQ96JP0 617 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms