RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MAGEH1Q9H213 219 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 NEUROG2Q9H2A3 272 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 C6orf106Q9H6K1 298 aaPredicted RBP14.89□□□□□ -0.03
SEC13-208ENST00000397109 NHEJ1Q9H9Q4 299 aaPredicted RBP14.89□□□□□ -0.03
SEC13-208ENST00000397109 TPX2Q9ULW0 747 aaKnown RBP14.89□□□□□ -0.03
SEC13-208ENST00000397109 HPCAL4Q9UM19 191 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 ASCC3Q8N3C0 2202 aaKnown RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 KNL1Q8NG31 2342 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 EIF3CLB5ME19 914 aaKnown RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 ARHGAP33O14559 1287 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 BCAT2O15382 392 aaPredicted RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 ZMPSTE24O75844 475 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 NDUFA10O95299 355 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 IPO7O95373 1038 aaKnown RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 LCA5LO95447 670 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 EPHB2P29323 1055 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 RECQLP46063 649 aaPredicted RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 GALCP54803 685 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 TUBB2AQ13885 445 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 KIAA0895LQ68EN5 471 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 OR2T34Q8NGX1 318 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 SNX19Q92543 992 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 CCDC42Q96M95 316 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 EIF3CQ99613 913 aaKnown RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 TUBB2BQ9BVA1 445 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 ACE2Q9BYF1 805 aaPredicted RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 CEP44Q9C0F1 390 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 CATSPERBQ9H7T0 1116 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 EIF2B4Q9UI10 523 aaKnown RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 DNAI1Q9UI46 699 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 PPM1HQ9ULR3 514 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 NEU3Q9UQ49 428 aa14.88□□□□□ -0.03
SEC13-208ENST00000397109 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.88□□□□□ -0.03
SEC13-208ENST00000397109 CHD5Q8TDI0 1954 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 DYNC1I1O14576 645 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 SLC7A4O43246 635 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 RAMP2O60895 175 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 CCDC15Q0P6D6 951 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 ACAP1Q15027 740 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
SEC13-208ENST00000397109 LINGO4Q6UY18 593 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 DNAAF5Q86Y56 855 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 PYROXD2Q8N2H3 581 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 ZCCHC9Q8N567 271 aaKnown RBP14.87□□□□□ -0.03
SEC13-208ENST00000397109 AADATQ8N5Z0 425 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 PCDH20Q8N6Y1 951 aaKnown RBP14.87□□□□□ -0.03
SEC13-208ENST00000397109 RTL3Q8N8U3 475 aaKnown RBP14.87□□□□□ -0.03
SEC13-208ENST00000397109 PIP4K2CQ8TBX8 421 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 ARHGEF2Q92974 986 aaKnown RBP14.87□□□□□ -0.03
SEC13-208ENST00000397109 BIRC7Q96CA5 298 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 MAGEB5Q9BZ81 275 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 KDM4CQ9H3R0 1056 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 OSGEPQ9NPF4 335 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 SERGEFQ9UGK8 458 aa14.87□□□□□ -0.03
SEC13-208ENST00000397109 LAMA1P25391 3075 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 NYNRINQ9P2P1 1898 aaKnown RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 ZSCAN5CA6NGD5 496 aaPredicted RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 FAM47DPA6NHR8 397 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 WASH4PA8MWX3 477 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 K7ERQ8 282 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 FGF10O15520 208 aaPredicted RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 CREB3O43889 395 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 AKR1B10O60218 316 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 BNIP3LO60238 219 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 FSBPO95073 299 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 PRNPP04156 253 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 GLDCP23378 1020 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 CD27P26842 260 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 CHRNA3P32297 505 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 MAPK8P45983 427 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 SERPINH1P50454 418 aaKnown RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 YBEYP58557 167 aaPredicted RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 SEMA3BQ13214 749 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 ERMARDQ5T6L9 678 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 C22orf39Q6P5X5 142 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 ALKBH5Q6P6C2 394 aaKnown RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 NCEH1Q6PIU2 408 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 PSTKQ8IV42 348 aaKnown RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 TMIEQ8NEW7 156 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 OR2A12Q8NGT7 310 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 OR14C36Q8NHC7 312 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 C1orf216Q8TAB5 229 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 ISG20Q96AZ6 181 aaKnown RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 GTPBP2Q9BX10 602 aaKnown RBP14.86□□□□□ -0.03
SEC13-208ENST00000397109 DEF6Q9H4E7 631 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 NDFIP2Q9NV92 336 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 AP4E1Q9UPM8 1137 aa14.86□□□□□ -0.03
SEC13-208ENST00000397109 SMAD6O43541 496 aaKnown RBP14.85□□□□□ -0.03
SEC13-208ENST00000397109 PRPSAP2O60256 369 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 KIF5CO60282 957 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 DRD3P35462 400 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 ACVRL1P37023 503 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 CCR5P51681 352 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 AFF3P51826 1226 aaKnown RBP14.85□□□□□ -0.03
SEC13-208ENST00000397109 ZNF135P52742 658 aaPredicted RBP14.85□□□□□ -0.03
SEC13-208ENST00000397109 ADPRHP54922 357 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 ARF5P84085 180 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 TEAD4Q15561 434 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms