RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 HEY2Q9UBP5 337 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 CCDC195A0A1B0GUA6 201 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 PLIN3O60664 434 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 ATP5BP06576 529 aaKnown RBP16.4■□□□□ 0.22
SNX6-202ENST00000396526 APOA4P06727 396 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SNCBQ16143 134 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 MTDHQ86UE4 582 aaKnown RBP16.4■□□□□ 0.22
SNX6-202ENST00000396526 PARP9Q8IXQ6 854 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 CALML6Q8TD86 181 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 ATXN7L3BQ96GX2 97 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 MECRQ9BV79 373 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 RETREG1Q9H6L5 497 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 PRDM5Q9NQX1 630 aaPredicted RBP16.4■□□□□ 0.22
SNX6-202ENST00000396526 NDFIP2Q9NV92 336 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SLC17A6Q9P2U8 582 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 NMBRP28336 390 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 OR1E1P30953 314 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 LAMB3Q13751 1172 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 SEPT6Q14141 434 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 FSTL4Q6MZW2 842 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 TMEM120AQ9BXJ8 343 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 MRM3Q9HC36 420 aaKnown RBP16.39■□□□□ 0.21
SNX6-202ENST00000396526 IL1RAPL1Q9NZN1 696 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 BACE2Q9Y5Z0 518 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 PTPRDP23468 1912 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 A0A096LPK6 155 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 HEATR9A2RTY3 570 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 TBC1D4O60343 1298 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 OR1D2P34982 312 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 POLD2P49005 469 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 SLC12A2P55011 1212 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 WNT3AP56704 352 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 CDK18Q07002 472 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 GPNMBQ14956 572 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 RASIP1Q5U651 963 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 ARID3BQ8IVW6 561 aaPredicted RBP16.39■□□□□ 0.21
SNX6-202ENST00000396526 HMCESQ96FZ2 354 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 VPS39Q96JC1 886 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 RHOJQ9H4E5 214 aa16.39■□□□□ 0.21
SNX6-202ENST00000396526 IGLV3-10A0A075B6K4 115 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 CARNS1A5YM72 827 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 CXCL10P02778 98 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 SERPINE1P05121 402 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 MYL2P10916 166 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 IL10RBQ08334 325 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 C16orf46Q6P387 395 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
SNX6-202ENST00000396526 LCA5Q86VQ0 697 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 RFWD2Q8NHY2 731 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 OVCA2Q8WZ82 227 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 FAM167BQ9BTA0 163 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 ANKRD6Q9Y2G4 727 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 TCAF1Q9Y4C2 921 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.38■□□□□ 0.21
SNX6-202ENST00000396526 CPA3P15088 417 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 USP10Q14694 798 aaKnown RBP16.38■□□□□ 0.21
SNX6-202ENST00000396526 VEPH1Q14D04 833 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 PCSK7Q16549 785 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 INPP5DQ92835 1189 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 AGAP2Q99490 1192 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 TRPM5Q9NZQ8 1165 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 MTRRQ9UBK8 725 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 TTC3P53804 2025 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 DRGXA6NNA5 263 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 CCDC22O60826 627 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 PBX3P40426 434 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 ALDH1A3P47895 512 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 ZNF235Q14590 738 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 RABGAP1LQ5R372 815 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 HECTD3Q5T447 861 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 SLC8B1Q6J4K2 584 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 TMEM169Q96HH4 297 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 RILPQ96NA2 401 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 AFF4Q9UHB7 1163 aaKnown RBP16.38■□□□□ 0.21
SNX6-202ENST00000396526 SLC39A10Q9ULF5 831 aa16.38■□□□□ 0.21
SNX6-202ENST00000396526 VAPBO95292 243 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 KPNA2P52292 529 aaKnown RBP16.37■□□□□ 0.21
SNX6-202ENST00000396526 RANBP10Q6VN20 620 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 ISL2Q96A47 359 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 TTLL2Q9BWV7 592 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 PAK6Q9NQU5 681 aaPredicted RBP16.37■□□□□ 0.21
SNX6-202ENST00000396526 OGDHLQ9ULD0 1010 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 SHROOM3Q8TF72 1996 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 TACR2P21452 398 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 ELF1P32519 619 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 SERPINH1P50454 418 aaKnown RBP16.37■□□□□ 0.21
SNX6-202ENST00000396526 MNAT1P51948 309 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 ELF3P78545 371 aaPredicted RBP16.37■□□□□ 0.21
SNX6-202ENST00000396526 ALFQ53S48 1182 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 KDELC2Q7Z4H8 507 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
SNX6-202ENST00000396526 NLRC5Q86WI3 1866 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 CCDC78A2IDD5 438 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 CNTN5O94779 1100 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 DLDP09622 509 aaKnown RBP16.37■□□□□ 0.21
SNX6-202ENST00000396526 ZDHHC11BP0C7U3 371 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 OCRLQ01968 901 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 ILF2Q12905 390 aaKnown RBP16.37■□□□□ 0.21
SNX6-202ENST00000396526 ANKRD33Q7Z3H0 272 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 CLNKQ7Z7G1 428 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms