RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SLC2A14Q8TDB8 520 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 FAM172AQ8WUF8 416 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NMD3Q96D46 503 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 GLT1D1Q96MS3 346 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 SPATA13Q96N96 652 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 AGAP3Q96P47 875 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PANX3Q96QZ0 392 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CORO1BQ9BR76 489 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CCDC77Q9BR77 488 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ZNF408Q9H9D4 720 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NPHS2Q9NP85 383 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CASS4Q9NQ75 786 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 TJP2Q9UDY2 1190 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ADAM28Q9UKQ2 775 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 HBS1LQ9Y450 684 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 ABHD14A-ACY1A0A1B0GW23 586 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 NBNO60934 754 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 SPAG7O75391 227 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PAPSS2O95340 614 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 TGDSO95455 350 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ZBED1O96006 694 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ALDH2P05091 517 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CD58P19256 250 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 GRK4P32298 578 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 GJA8P48165 433 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 VPS41P49754 854 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 SERPINB8P50452 374 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 AP2B1P63010 937 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 HTRA4P83105 476 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 ROR1Q01973 937 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ACVR1Q04771 509 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 MSLNQ13421 630 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 CYLC2Q14093 348 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 PDK1Q15118 436 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TMED2Q15363 201 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CYP4A22Q5TCH4 519 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 IZUMO3Q5VZ72 239 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 WSCD1Q658N2 575 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PPP4R4Q6NUP7 873 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 AAGABQ6PD74 315 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 RAPH1Q70E73 1250 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 MON1AQ86VX9 555 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PAF1Q8N7H5 531 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PDCD7Q8N8D1 485 aaKnown RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 PDZD8Q8NEN9 1154 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 GFM2Q969S9 779 aaKnown RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 SIKE1Q9BRV8 207 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TRABDQ9H4I3 376 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 FAIMQ9NVQ4 179 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 NDE1Q9NXR1 346 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 HEY2Q9UBP5 337 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 SUN2Q9UH99 717 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 IRAK3Q9Y616 596 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 COL4A3Q01955 1670 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 BOLA2-SMG1P6H3BVE0 249 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CST8O60676 142 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PRMT3O60678 531 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TM7SF2O76062 418 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PEX11BO96011 259 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 LTFP02788 710 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TROVE2P10155 538 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS41-203ENST00000395969 HAPLN1P10915 354 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 ALOX15P16050 662 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 PORP16435 677 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 MX2P20592 715 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CES1P23141 567 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CYP2F1P24903 491 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ADRA1AP35348 466 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PGM1P36871 562 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 MLH1P40692 756 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 MAGEA4P43358 317 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ARL4CP56559 192 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 GPX6P59796 221 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CREB5Q02930 508 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ASPHQ12797 758 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TRIM32Q13049 653 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 MED21Q13503 144 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TRIP4Q15650 581 aaPredicted RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 INSCQ1MX18 579 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 KCTD21Q4G0X4 260 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CFAP157Q5JU67 520 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TWF2Q6IBS0 349 aaKnown RBP5.46□□□□□ -1.54
VPS41-203ENST00000395969 PHLDB2Q86SQ0 1253 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PRUNE1Q86TP1 453 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 SLC26A11Q86WA9 606 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 LRRC6Q86X45 466 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 TMPRSS6Q8IU80 811 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 SLC15A3Q8IY34 581 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 NUP93Q8N1F7 819 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 C12orf29Q8N999 325 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 ATP11CQ8NB49 1132 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 KCTD6Q8NC69 237 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 CEP70Q8NHQ1 597 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 FNDC8Q8TC99 324 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 DCAKDQ8WVC6 231 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 SLC44A1Q8WWI5 657 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 SEPT8Q92599 483 aa5.46□□□□□ -1.54
VPS41-203ENST00000395969 PRR11Q96HE9 360 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms