RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TRIM68Q6AZZ1 485 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 APCDD1Q8J025 514 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 PDIK1LQ8N165 341 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 DCAF4L2Q8NA75 395 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 NECTIN4Q96NY8 510 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 PPP1R2P1Q96PQ5 205 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 GORASP1Q9BQQ3 440 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 SAYSD1Q9NPB0 183 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 HAUS2Q9NVX0 235 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 MIA3Q5JRA6 1907 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 ERI2A8K979 691 aaKnown RBP20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 SNAP91O60641 907 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 LAMP2P13473 410 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 MAXP61244 160 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 TNK2Q07912 1038 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 PDIA2Q13087 525 aaKnown RBP20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 SLC12A1Q13621 1099 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 RFTN1Q14699 578 aaPredicted RBP20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 FNBP1LQ5T0N5 605 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 SMRP1Q8NCR6 262 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 SERPINB12Q96P63 405 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 MLPHQ9BV36 600 aaPredicted RBP20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 C2orf49Q9BVC5 232 aaPredicted RBP20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 PHACTR1Q9C0D0 580 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 CD207Q9UJ71 328 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 AAR2Q9Y312 384 aaKnown RBP20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 ACTL7AQ9Y615 435 aa20.77■□□□□ 0.92
VCPKMT-202ENST00000395860 ATP8B1O43520 1251 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 ZMPSTE24O75844 475 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 ANXA9O76027 345 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 ADH1CP00326 375 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 CYP17A1P05093 508 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 HSD17B3P37058 310 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 VITQ6UXI7 678 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 ASIC4Q96FT7 647 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 ZFYVE19Q96K21 471 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 CINPQ9BW66 212 aaPredicted RBP20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 CDC42EP4Q9H3Q1 356 aaKnown RBP20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 ABCB8Q9NUT2 735 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 UBP1Q9NZI7 540 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 SEPT3Q9UH03 358 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 VPS51Q9UID3 782 aa20.77■□□□□ 0.91
VCPKMT-202ENST00000395860 EIF3HO15372 352 aaKnown RBP eCLIP20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 PSMD3O43242 534 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 NFATC1O95644 943 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 AP2A1O95782 977 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 ADH5P11766 374 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 HLA-FP30511 346 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 PLEKHG6Q3KR16 790 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 PRPF38BQ5VTL8 546 aaKnown RBP20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 LINGO4Q6UY18 593 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 RELL1Q8IUW5 271 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 ZBED8Q8IZ13 594 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 PGBD5Q8N414 524 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 SPATA22Q8NHS9 363 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 ATP2A3Q93084 1043 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 ACDQ96AP0 544 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 OXNAD1Q96HP4 312 aaPredicted RBP20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 POLR1EQ9GZS1 481 aaKnown RBP20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 SLC25A51Q9H1U9 297 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 SEMA4AQ9H3S1 761 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 EBF3Q9H4W6 596 aa20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 XAB2Q9HCS7 855 aaKnown RBP20.76■□□□□ 0.91
VCPKMT-202ENST00000395860 MAP2K7O14733 419 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 MAGEA4P43358 317 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 PLK1P53350 603 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 GEMP55040 296 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 MTM1Q13496 603 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 SPARCL1Q14515 664 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 PDGFRLQ15198 375 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 BBS9Q3SYG4 887 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 SPDYCQ5MJ68 293 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 KCTD11Q693B1 232 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 RETSATQ6NUM9 610 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 TRMT10CQ7L0Y3 403 aaKnown RBP20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 CAND1Q86VP6 1230 aaKnown RBP20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 MFSD6LQ8IWD5 586 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 YAF2Q8IY57 180 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 NAT16Q8N8M0 369 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 LMLNQ96KR4 655 aa20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 PABPC3Q9H361 631 aaKnown RBP20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 USP15Q9Y4E8 981 aaPredicted RBP20.75■□□□□ 0.91
VCPKMT-202ENST00000395860 E7ESA3 106 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 AVILO75366 819 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 BANF1O75531 89 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 SASH3O75995 380 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 MT-CYBP00156 380 aaPredicted RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 ARSAP15289 507 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 GRIA1P42261 906 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 UAP1Q16222 522 aaPredicted RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 MSS51Q4VC12 460 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 PITRM1Q5JRX3 1037 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 HP1BP3Q5SSJ5 553 aaPredicted RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 CFAP58Q5T655 872 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 ZNF534Q76KX8 674 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 ELSPBP1Q96BH3 223 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 C9orf72Q96LT7 481 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 XPO6Q96QU8 1125 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 KXD1Q9BQD3 176 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 FAM83CQ9BQN1 747 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms