RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CACHD1Q5VU97 1274 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
MSH5-205ENST00000395853 ARSKQ6UWY0 536 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 ZBTB46Q86UZ6 589 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 DNAAF5Q86Y56 855 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 PXYLP1Q8TE99 480 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 ACDQ96AP0 544 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 ZFYVE19Q96K21 471 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 KATNAL1Q9BW62 490 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 DCLK3Q9C098 648 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 RNF208Q9H0X6 261 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 HMG20AQ9NP66 347 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
MSH5-205ENST00000395853 ARHGEF4Q9NR80 690 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 KBTBD4Q9NVX7 518 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 POLG2Q9UHN1 485 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 CYB5R1Q9UHQ9 305 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 SLC24A2Q9UI40 661 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 ZNF229Q9UJW7 825 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 HTTP42858 3142 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 SMCHD1A6NHR9 2005 aa9.04□□□□□ -0.96
MSH5-205ENST00000395853 hCG_1984214I3L0E3 225 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 PDHXO00330 501 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 SLITRK5O94991 958 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 ASS1P00966 412 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 DCKP27707 260 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CTGFP29279 349 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 SNAP25P60880 206 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CARTPTQ16568 116 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 GPATCH4Q5T3I0 446 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 FAM91A1Q658Y4 838 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 BTN2A1Q7KYR7 527 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 HM13Q8TCT9 377 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 SNX19Q92543 992 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 GJA10Q969M2 543 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 RMND5BQ96G75 393 aaPredicted RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 B3GALT6Q96L58 329 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 ERGIC2Q96RQ1 377 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 MNTQ99583 582 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 OR51B5Q9H339 312 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CXorf21Q9HAI6 301 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 BRD7Q9NPI1 651 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 COQ3Q9NZJ6 369 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 TRPM5Q9NZQ8 1165 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 KANSL3Q9P2N6 904 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 MTO1Q9Y2Z2 717 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 MGAMO43451 1857 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 TRIM49BA6NDI0 452 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 H3BNH8 94 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 AURKAO14965 403 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 ZBTB5O15062 677 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 NOL3O60936 208 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 PTP4A3O75365 173 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 RFPL2O75678 378 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 ALDH1A2O94788 518 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 GABRB3P28472 473 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 GALNT2Q10471 571 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 DHX34Q14147 1143 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 GALNT3Q14435 633 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 KIAA1614Q5VZ46 1190 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 RANBP10Q6VN20 620 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 TSPYL5Q86VY4 417 aaPredicted RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 FAM151AQ8WW52 585 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 C18orf8Q96DM3 657 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 PRR11Q96HE9 360 aaPredicted RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 MLPHQ9BV36 600 aaPredicted RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 WDR12Q9GZL7 423 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 CPA4Q9UI42 421 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 WBP11Q9Y2W2 641 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 FRMPD4Q14CM0 1322 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CCNKO75909 580 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 ACSL3O95573 720 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 POP4O95707 220 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 ZNF182P17025 639 aaPredicted RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 ITIH2P19823 946 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 GP5P40197 560 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CLK2P49760 499 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 PMS1P54277 932 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 KRT17Q04695 432 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 VAC14Q08AM6 782 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 DBPQ10586 325 aaPredicted RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 HERC3Q15034 1050 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 DLG2Q15700 870 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 SGCAQ16586 387 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CALCRLQ16602 461 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 TDRD12Q587J7 1177 aaKnown RBP9.03□□□□□ -0.96
MSH5-205ENST00000395853 FAM47CQ5HY64 1035 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 TOR2AQ5JU69 321 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 BEND4Q6ZU67 534 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 HAUS6Q7Z4H7 955 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 FBXO11Q86XK2 927 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CATSPER3Q86XQ3 398 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 ZNF354CQ86Y25 554 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 CAMK1DQ8IU85 385 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 NUDCD3Q8IVD9 361 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 GALNT12Q8IXK2 581 aa9.03□□□□□ -0.96
MSH5-205ENST00000395853 PQLC1Q8N2U9 271 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms