RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 KBTBD2Q8IY47 623 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 JOSD2Q8TAC2 188 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 APBB2Q92870 758 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 DHRS1Q96LJ7 313 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 PGLYRP2Q96PD5 576 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 RNF39Q9H2S5 420 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ADAMTS10Q9H324 1103 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TLR8Q9NR97 1041 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 CHST7Q9NS84 486 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 STMN3Q9NZ72 180 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TRPM5Q9NZQ8 1165 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 SLC8A2Q9UPR5 921 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 STXBP5LQ9Y2K9 1186 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MYH11P35749 1972 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TNS1Q9HBL0 1735 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 H3BSA7 217 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 CLDN5O00501 218 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 DNALI1O14645 258 aaPredicted RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 MAGEC1O60732 1142 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MAP3K6O95382 1288 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ENO2P09104 434 aaPredicted RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 TFPTP0C1Z6 253 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 KCNE1P15382 129 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 NR2C2P49116 596 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 KPNA1P52294 538 aaPredicted RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 DEFA1P59665 94 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 DEFA3P59666 94 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MRPS5P82675 430 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 SPIDRQ14159 915 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ZNF235Q14590 738 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MORF4L2Q15014 288 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 VSTM1Q6UX27 236 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 HORMAD1Q86X24 394 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 XYLT1Q86Y38 959 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MIB1Q86YT6 1006 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ERI1Q8IV48 349 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 RNF148Q8N7C7 305 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 PRELID2Q8N945 189 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 GATA6Q92908 595 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MYLPFQ96A32 169 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 DCUN1D1Q96GG9 259 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 NSMCE3Q96MG7 304 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 PPP1R2P1Q96PQ5 205 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MAGEB5Q9BZ81 275 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ARMC7Q9H6L4 198 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 LRRC19Q9H756 370 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 PCDH9Q9HC56 1237 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 GPAMQ9HCL2 828 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ERVK-5Q9HDB9 667 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ABCC13Q9NSE7 274 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 FAIMQ9NVQ4 179 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 FLRT1Q9NZU1 646 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 CNTN3Q9P232 1028 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ZC3H7BQ9UGR2 993 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 PCYOX1Q9UHG3 505 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 SLC24A2Q9UI40 661 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 DRG1Q9Y295 367 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 SF3B1O75533 1304 aaKnown RBP eCLIP5.78□□□□□ -1.485e-6■■■■■ 86.9
RFFL-202ENST00000394597 SLC12A8A0AV02 714 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TRIM49D1C9J1S8 452 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 APOC4-APOC2K7ER74 178 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 DPYSL4O14531 572 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 GNGT2O14610 69 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 NCAM2O15394 837 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ATP9BO43861 1147 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TPST1O60507 370 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 RNASEH1O60930 286 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 SIN3BO75182 1162 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SPAG6O75602 509 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 APOC2P02655 101 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 LRG1P02750 347 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 FAM163BP0C2L3 166 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 POLR2EP19388 210 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 IL10P22301 178 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 XPAP23025 273 aaPredicted RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 WARSP23381 471 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 CHKAP35790 457 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SLC11A2P49281 568 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 DLG1Q12959 904 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 BNC2Q6ZN30 1099 aaPredicted RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 NDUFAF2Q8N183 169 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TMEM199Q8N511 208 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 EFCAB3Q8N7B9 438 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 FNIP1Q8TF40 1166 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TMEM174Q8WUU8 243 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ART4Q93070 314 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TAMM41Q96BW9 452 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PAFAH2Q99487 392 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 NMUR2Q9GZQ4 415 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 LIN28AQ9H9Z2 209 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 OLA1Q9NTK5 396 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 DNPEPQ9ULA0 475 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ADAMTSL1Q8N6G6 1762 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 DLEC1Q9Y238 1755 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PTPRJQ12913 1337 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ADGRA2Q96PE1 1338 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 GPR32O75388 356 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 OXSR1O95747 527 aaPredicted RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 NAT1P18440 290 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 MATKP42679 507 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms