RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TRIM38O00635 465 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 SLC31A1O15431 190 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 RRP8O43159 456 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 SMAD6O43541 496 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 SIGLEC6O43699 453 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 BNIP3LO60238 219 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 ZNF821O75541 412 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 ZMPSTE24O75844 475 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 RRM1P23921 792 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 INSM1Q01101 510 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 CAMK4Q16566 473 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 TPD52L1Q16890 204 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 MIIPQ5JXC2 388 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 FAM102AQ5T9C2 384 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 LRRC69Q6ZNQ3 347 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 ERICH1Q86X53 443 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 PCDH20Q8N6Y1 951 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 MSANTD4Q8NCY6 345 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 BAP1Q92560 729 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 ARRDC3Q96B67 414 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 BBC3Q96PG8 261 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 UBL7Q96S82 380 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 TBCBQ99426 244 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 PDCL3Q9H2J4 239 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 USP29Q9HBJ7 922 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 PLCB1Q9NQ66 1216 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 TMEM59LQ9UK28 342 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 AK5Q9Y6K8 562 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 DOCK4Q8N1I0 1966 aa17.87■□□□□ 0.45
SNRPA1-202ENST00000394082 MYLKQ15746 1914 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 NEMP2A6NFY4 417 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 TK2O00142 265 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 AP1G1O43747 822 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 ENDOD1O94919 500 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 GP1BAP07359 652 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 CKMT1AP12532 417 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 GLDCP23378 1020 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 ITGB7P26010 798 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 ERCC5P28715 1186 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 SERPINH1P50454 418 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 RNASE9P60153 205 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 RPS21P63220 83 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 NRG1Q02297 640 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 DRAP1Q14919 205 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 ARSIQ5FYB1 569 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 KIAA1161Q6NSJ0 714 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 DPY19L3Q6ZPD9 716 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 FAM181AQ8N9Y4 354 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 CHST14Q8NCH0 376 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 LSM14AQ8ND56 463 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 FGF11Q92914 225 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 ISG20Q96AZ6 181 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 TUBGCP2Q9BSJ2 902 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 NAA15Q9BXJ9 866 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 ZYG11BQ9C0D3 744 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 NLGN3Q9NZ94 848 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 MPP6Q9NZW5 540 aa17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 ZFR2Q9UPR6 939 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-202ENST00000394082 KALRNO60229 2985 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 A6NNZ2 444 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 TLX3O43711 291 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 SDC3O75056 442 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 LEFTY1O75610 366 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 PIAS2O75928 621 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 PNMA6AP0CW24 399 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 GIMD1P0DJR0 217 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 ALPPL2P10696 532 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 PRLRP16471 622 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 FLT3P36888 993 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 ETFBP38117 255 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 NEK3P51956 506 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 CLDN6P56747 220 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 SEMG2Q02383 582 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 KLHDC7AQ5VTJ3 777 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 GCNT7Q6ZNI0 430 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 TFAP2DQ7Z6R9 452 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 OR13H1Q8NG92 308 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 ASB12Q8WXK4 309 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 DCBLD2Q96PD2 775 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 DUSP23Q9BVJ7 150 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 PRORYQ9H606 182 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 EVA1BQ9NVM1 165 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 CA5BQ9Y2D0 317 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 WASF2Q9Y6W5 498 aa17.85■□□□□ 0.45
SNRPA1-202ENST00000394082 ASXL3Q9C0F0 2248 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 SCAMP1O15126 338 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 LZTS3O60299 673 aaPredicted RBP17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 PCDH8O95206 1070 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 ADRB3P13945 408 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 UCHL3P15374 230 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 L1CAMP32004 1257 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 ACTN2P35609 894 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 HNRNPKP61978 463 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 CARD16Q5EG05 197 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 CT47A1Q5JQC4 288 aaPredicted RBP17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 CDCP2Q5VXM1 449 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 LINGO4Q6UY18 593 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 KYAT3Q6YP21 454 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 ZNF677Q86XU0 584 aa17.84■□□□□ 0.45
SNRPA1-202ENST00000394082 SLC22A18ASQ8N1D0 253 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms