RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SLC7A14Q8TBB6 771 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 ACTRT2Q8TDY3 377 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 USP33Q8TEY7 942 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 SNRNP27Q8WVK2 155 aaKnown RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 CERS2Q96G23 380 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 P2RY11Q96G91 374 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 SPATA13Q96N96 652 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 PLAC1Q9HBJ0 212 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 GTF2IRD1Q9UHL9 959 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 EMCNQ9ULC0 261 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 AP4B1Q9Y6B7 739 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 CHRNA1P02708 482 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 FAM200BP0CF97 657 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 THRAP10827 490 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 PRAMEP78395 509 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 MSLNQ13421 630 aaPredicted RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 USP10Q14694 798 aaKnown RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 SEL1L3Q68CR1 1132 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 ARHGAP17Q68EM7 881 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 RNF111Q6ZNA4 994 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 MIPOL1Q8TD10 442 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 ARL5CA6NH57 179 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 MFSD11O43934 449 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 TRIM13O60858 407 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 USP17L7P0C7H9 530 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 SPATA31D3P0C874 917 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 KCNE1P15382 129 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 NPR3P17342 541 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 CCND3P30281 292 aaPredicted RBP11.02□□□□□ -0.64
BRF1-204ENST00000392557 L1CAMP32004 1257 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 SOX11P35716 441 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 BRCC3P46736 316 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 MAP7D1Q3KQU3 841 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 SH2D4BQ5SQS7 431 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 SYPL2Q5VXT5 272 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 ZNF534Q76KX8 674 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 MAVSQ7Z434 540 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 CRYBG2Q8N1P7 616 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 PCDH20Q8N6Y1 951 aaKnown RBP11.02□□□□□ -0.64
BRF1-204ENST00000392557 C3orf58Q8NDZ4 430 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 ULBP1Q9BZM6 244 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 PRDM12Q9H4Q4 367 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 CAAP1Q9H8G2 361 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 NMRAL1Q9HBL8 299 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.64
BRF1-204ENST00000392557 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 DNAJB4Q9UDY4 337 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 BCAP29Q9UHQ4 241 aa11.02□□□□□ -0.64
BRF1-204ENST00000392557 CCNT2O60583 730 aaKnown RBP11.02□□□□□ -0.65
BRF1-204ENST00000392557 GCATO75600 419 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 PIGNO95427 931 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 IL1BP01584 269 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 PIK3R1P27986 724 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 SREBF2Q12772 1141 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 PDK1Q15118 436 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 PCBP1Q15365 356 aaKnown RBP eCLIP11.02□□□□□ -0.65
BRF1-204ENST00000392557 TLR1Q15399 786 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 KCNA10Q16322 511 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 GEN1Q17RS7 908 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 FBXL19Q6PCT2 694 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 C16orf89Q6UX73 402 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 RNF34Q969K3 372 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 MFSD3Q96ES6 412 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 OMDQ99983 421 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 EPS15L1Q9UBC2 864 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 PADI3Q9ULW8 664 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 TK2O00142 265 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 STAMBPO95630 424 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 LTFP02788 710 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 NCAM1P13591 858 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 PRKAR2AP13861 404 aaKnown RBP11.02□□□□□ -0.65
BRF1-204ENST00000392557 XRCC1P18887 633 aaPredicted RBP11.02□□□□□ -0.65
BRF1-204ENST00000392557 TPSB2P20231 275 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 GRIA2P42262 883 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 SERPINB8P50452 374 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 THOP1P52888 689 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 USP46P62068 366 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 GK3PQ14409 553 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 TPSAB1Q15661 275 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 KIAA0319Q5VV43 1072 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 FAM91A1Q658Y4 838 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 SLC9A4Q6AI14 798 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 FSTL4Q6MZW2 842 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 SLC26A9Q7LBE3 791 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 TMC7Q7Z402 723 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 DSELQ8IZU8 1212 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 MAPK15Q8TD08 544 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 SORT1Q99523 831 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 NPAS2Q99743 824 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 SIKE1Q9BRV8 207 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 DUSP16Q9BY84 665 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 CDH19Q9H159 772 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
BRF1-204ENST00000392557 SLC10A3P09131 477 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CD1EP15812 388 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 ACADSBP45954 432 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 DBN1Q16643 649 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms