RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 C1orf21Q9H246 121 aa20.27■□□□□ 0.84
CSNK1D-203ENST00000392334 MTIF3Q9H2K0 278 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-203ENST00000392334 SPG21Q9NZD8 308 aa20.27■□□□□ 0.84
CSNK1D-203ENST00000392334 SPECC1L-ADORA2AF8WAN1 911 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 ARHGEF15O94989 841 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 TBX18O95935 607 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 ATF6P18850 670 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 CNTFP26441 200 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 TUBP50607 506 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 SLC10A2Q12908 348 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 CDKL3Q8IVW4 592 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 ARID3BQ8IVW6 561 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 RNF139Q8WU17 664 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 FBXO32Q969P5 355 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 PGAP3Q96FM1 320 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 SIGLEC10Q96LC7 697 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 FBXO44Q9H4M3 255 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 SCML2Q9UQR0 700 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 MAP3K7O43318 606 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 SERPINA6P08185 405 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 CSH1P0DML2 217 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 CSH2P0DML3 217 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 YWHAQP27348 245 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 MXRA7P84157 204 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 TAF10Q12962 218 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 MON1AQ86VX9 555 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 SCUBE1Q8IWY4 988 aa20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 RBM15BQ8NDT2 890 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 CLP1Q92989 425 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 EBNA1BP2Q99848 306 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 SPATS2LQ9NUQ6 558 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 PPARGC1AQ9UBK2 798 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 HBS1LQ9Y450 684 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-203ENST00000392334 GCATO75600 419 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 SEC24AO95486 1093 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 F9P00740 461 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 ENO1P06733 434 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 CALRP27797 417 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 GLUD2P49448 558 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 CXCR3P49682 368 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 RCN2Q14257 317 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 GSTA3Q16772 222 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 C6orf163Q5TEZ5 329 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 OR52E8Q6IFG1 317 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 KYAT3Q6YP21 454 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 ZNF534Q76KX8 674 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 MYLK4Q86YV6 388 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 SP7Q8TDD2 431 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 IFT43Q96FT9 208 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 FAM161BQ96MY7 647 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 SIK2Q9H0K1 926 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 GPAMQ9HCL2 828 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 RRN3Q9NYV6 651 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 PCDHB12Q9Y5F1 795 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 PCDHA11Q9Y5I1 949 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 PLXNA4Q9HCM2 1894 aa20.25■□□□□ 0.83
CSNK1D-203ENST00000392334 HMX2A2RU54 273 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 EIF4E1BA6NMX2 242 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 H3BRJ5 948 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 EEF2KO00418 725 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 FGF18O76093 207 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 APRTP07741 180 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 ARL13BQ3SXY8 428 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 SYCP2LQ5T4T6 812 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 NCBP2-AS2Q69YL0 99 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 KLHL23Q8NBE8 558 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 ZNF184Q99676 751 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 STN1Q9H668 368 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 SCOCQ9UIL1 159 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 CIB2O75838 187 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 MOCS2O96007 188 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 AQP5P55064 265 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 ACTR3P61158 418 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 DSG1Q02413 1049 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 UCMAQ8WVF2 138 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 GATA6Q92908 595 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 SLC13A1Q9BZW2 595 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 CYP4F11Q9HBI6 524 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 XAB2Q9HCS7 855 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 THAP1Q9NVV9 213 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 OR12D3Q9UGF7 316 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 BACE2Q9Y5Z0 518 aa20.24■□□□□ 0.83
CSNK1D-203ENST00000392334 MAGEA13PA6NCF6 341 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 IRAK2O43187 625 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 UGT1A9O60656 530 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 SPATA31D3P0C874 917 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 SRGAP2BP0DMP2 458 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 EFEMP1Q12805 493 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 STX3Q13277 289 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 BMPR2Q13873 1038 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 FAXCQ5TGI0 409 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 SPATA31D4Q6ZUB0 917 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 RFX8Q6ZV50 586 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 TP53INP2Q8IXH6 220 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 ULK2Q8IYT8 1036 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 NDUFAF2Q8N183 169 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 DTX3LQ8TDB6 740 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 ACMSDQ8TDX5 336 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 NTAN1Q96AB6 310 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 UGT1A7Q9HAW7 530 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms