RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 DSC1Q08554 894 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 GRSF1Q12849 480 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRAV40-201ENST00000390467 COASYQ13057 564 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 PUM3Q15397 648 aaKnown RBP3.59□□□□□ -1.83
TRAV40-201ENST00000390467 CREB3L2Q70SY1 520 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 GALNT7Q86SF2 657 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 FJX1Q86VR8 437 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 WDR5BQ86VZ2 330 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 BRSK2Q8IWQ3 736 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 SCAIQ8N9R8 606 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 MIGA1Q8NAN2 632 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 TMED6Q8WW62 240 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 DNASE2BQ8WZ79 361 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 RMDN3Q96TC7 470 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 IFT27Q9BW83 186 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 CDT1Q9H211 546 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 VPS33BQ9H267 617 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 TXLNGQ9NUQ3 528 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 NDUFAF4Q9P032 175 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 MDFICQ9P1T7 246 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 LRFN1Q9P244 771 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 SEL1LQ9UBV2 794 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 ABHD14A-ACY1A0A1B0GW23 586 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 SRRM3A6NNA2 597 aaPredicted RBP3.58□□□□□ -1.84
TRAV40-201ENST00000390467 CYSRT1A8MQ03 144 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 BTBD18B2RXH4 712 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 HNRNPRO43390 633 aaKnown RBP3.58□□□□□ -1.84
TRAV40-201ENST00000390467 HLA-DQA2P01906 255 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 CSF1P09603 554 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 MYZAPP0CAP1 466 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 SETSIPP0DME0 302 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 ARSAP15289 507 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 NUDT6P53370 316 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 SEC61A1P61619 476 aaKnown RBP3.58□□□□□ -1.84
TRAV40-201ENST00000390467 PLCB4Q15147 1175 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 FAM76BQ5HYJ3 339 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 ATG9BQ674R7 924 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 PGBD2Q6P3X8 592 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 TOGARAM2Q6ZUX3 1019 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 SERPINA11Q86U17 422 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 PTGR2Q8N8N7 351 aaPredicted RBP3.58□□□□□ -1.84
TRAV40-201ENST00000390467 OR14A16Q8NHC5 309 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 SLC35F5Q8WV83 523 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 LHPPQ9H008 270 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.58□□□□□ -1.84
TRAV40-201ENST00000390467 DACT1Q9NYF0 836 aa3.58□□□□□ -1.84
TRAV40-201ENST00000390467 TARSL2A2RTX5 802 aaKnown RBP3.57□□□□□ -1.84
TRAV40-201ENST00000390467 LINC01553A4QN01 128 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 H0Y3Z8 333 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 RNMTO43148 476 aaKnown RBP3.57□□□□□ -1.84
TRAV40-201ENST00000390467 ZNF432O94892 652 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 CYP4B1P13584 511 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 NAGAP17050 411 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 EEF1A2Q05639 463 aaKnown RBP3.57□□□□□ -1.84
TRAV40-201ENST00000390467 C9orf50Q5SZB4 431 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 SYCP2LQ5T4T6 812 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 SYT13Q7L8C5 426 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 ZNF329Q86UD4 541 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 ZDHHC23Q8IYP9 409 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 CACNA2D3Q8IZS8 1091 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 TMEM163Q8TC26 289 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 OTUD7AQ8TE49 926 aaPredicted RBP3.57□□□□□ -1.84
TRAV40-201ENST00000390467 FAM216AQ8WUB2 273 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 ZNF333Q96JL9 665 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 TRAPPC9Q96Q05 1148 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 FIZ1Q96SL8 496 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 CADM1Q9BY67 442 aaKnown RBP3.57□□□□□ -1.84
TRAV40-201ENST00000390467 IL25Q9H293 177 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 CXorf56Q9H5V9 222 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 PLEKHA2Q9HB19 425 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 OCIAD1Q9NX40 245 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 HDAC6Q9UBN7 1215 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 LRCH1Q9Y2L9 728 aa3.57□□□□□ -1.84
TRAV40-201ENST00000390467 IGHV4-28A0A0C4DH34 117 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 C17orf102A2RUQ5 167 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 ASAP2O43150 1006 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 KCNJ13O60928 360 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 IGKV3-20P01619 116 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 DPP6P42658 865 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 PRKAA2P54646 552 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 ICA1Q05084 483 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 CTTNQ14247 550 aaKnown RBP3.56□□□□□ -1.84
TRAV40-201ENST00000390467 MYBPC2Q14324 1141 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 TANGO2Q6ICL3 276 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 CCDC117Q8IWD4 279 aaPredicted RBP3.56□□□□□ -1.84
TRAV40-201ENST00000390467 TEX45Q8NA69 505 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 GPT2Q8TD30 523 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 TMEM18Q96B42 140 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 DDX23Q9BUQ8 820 aaKnown RBP3.56□□□□□ -1.84
TRAV40-201ENST00000390467 C1QTNF4Q9BXJ3 329 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 TLR8Q9NR97 1041 aaKnown RBP3.56□□□□□ -1.84
TRAV40-201ENST00000390467 THAP1Q9NVV9 213 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 GRHPRQ9UBQ7 328 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 KCNG2Q9UJ96 466 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 BAG5Q9UL15 447 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 ICAM5Q9UMF0 924 aa3.56□□□□□ -1.84
TRAV40-201ENST00000390467 SRPRBQ9Y5M8 271 aaKnown RBP3.56□□□□□ -1.84
TRAV40-201ENST00000390467 IGLV5-52A0A0A0MRZ9 124 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 PLSCR5A0PG75 271 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms