RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 H0YJX3 145 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 GCATO75600 419 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 LYPLA1O75608 230 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-202ENST00000381990 FBXO21O94952 628 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 CRTAMO95727 393 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 THRAP10827 490 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 CDK4P11802 303 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 ODC1P11926 461 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 CKBP12277 381 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 MLNP12872 115 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 NCF2P19878 526 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-202ENST00000381990 MATKP42679 507 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 SERPINB8P50452 374 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 BCAR1P56945 870 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 RPL10AP62906 217 aaKnown RBP9.1□□□□□ -0.95
GPNMB-202ENST00000381990 TUSC3Q13454 348 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 ADGRE1Q14246 886 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 TIGD5Q53EQ6 642 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 SYCP2LQ5T4T6 812 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 SLC9A4Q6AI14 798 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 TRMT10BQ6PF06 316 aaKnown RBP9.1□□□□□ -0.95
GPNMB-202ENST00000381990 CLEC20AQ6ZU45 233 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 STRADAQ7RTN6 431 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 SETD3Q86TU7 594 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-202ENST00000381990 TICAM1Q8IUC6 712 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 CROCCP3Q8IVE0 287 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 NUP93Q8N1F7 819 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 METTL25Q8N6Q8 603 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 HIPK4Q8NE63 616 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 SHKBP1Q8TBC3 707 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 SREK1Q8WXA9 508 aaKnown RBP9.1□□□□□ -0.95
GPNMB-202ENST00000381990 STON2Q8WXE9 905 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 CNDP1Q96KN2 507 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 PAAF1Q9BRP4 392 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 LRRC4Q9HBW1 653 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 UBAP1Q9NZ09 502 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 COPG2Q9UBF2 871 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 TIMM13Q9Y5L4 95 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-202ENST00000381990 AP4B1Q9Y6B7 739 aa9.1□□□□□ -0.95
GPNMB-202ENST00000381990 A0A0J9YVX5 310 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 H2AFYO75367 372 aaKnown RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 TRMUO75648 421 aaKnown RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 POMCP01189 267 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ALDOAP04075 364 aaKnown RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 INHAP05111 366 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 RALBP11234 206 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 TFE3P19532 575 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 IL4RP24394 825 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 RBL1P28749 1068 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ADSLP30566 484 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 NUMBP49757 651 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 HK2P52789 917 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 USP4Q13107 963 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 PDE1CQ14123 709 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ZNF598Q86UK7 904 aaKnown RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 FAM35AQ86V20 835 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 GAB3Q8WWW8 586 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 UROC1Q96N76 676 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ZNF670Q9BS34 389 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 NAT9Q9BTE0 207 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 TRPV6Q9H1D0 765 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 HMX1Q9NP08 348 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 GPATCH2LQ9NWQ4 482 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 PCDHB12Q9Y5F1 795 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 PTCH2Q9Y6C5 1203 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 AK5Q9Y6K8 562 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 MYBPHLA2RUH7 354 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 INPPL1O15357 1258 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 DCXO43602 365 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 DAB1O75553 588 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 BEST1O76090 585 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 B3GAT3O94766 335 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 CYP11A1P05108 521 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ADARP55265 1226 aaKnown RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 NIPAL4Q0D2K0 466 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 KLF10Q13118 480 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ARHGEF6Q15052 776 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 DPYSL2Q16555 572 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 SLC25A52Q3SY17 297 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 LHX8Q68G74 356 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 EPGNQ6UW88 154 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ZNF534Q76KX8 674 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 METTL23Q86XA0 190 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 DEFB106AQ8N104 65 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 SIX6OS1Q8N1H7 587 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 SLC43A3Q8NBI5 491 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 SLAIN1Q8ND83 568 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 TRPC4APQ8TEL6 797 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 FAM149B1Q96BN6 582 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 PCED1BQ96HM7 432 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 MRPL1Q9BYD6 325 aaKnown RBP9.09□□□□□ -0.95
GPNMB-202ENST00000381990 GRIP2Q9C0E4 1043 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 TBCCD1Q9NVR7 557 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 RIMS3Q9UJD0 308 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 DSEQ9UL01 958 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 ZNF510Q9Y2H8 683 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 CENPFP49454 3210 aa9.09□□□□□ -0.95
GPNMB-202ENST00000381990 LOC100653049A0A140TA62 436 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 A0A1W2PQ45 241 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 A0A1W2PQY0 241 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms