RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SYCP1Q15431 976 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 HS1BP3Q53T59 392 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 PIP5KL1Q5T9C9 394 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 RBM43Q6ZSC3 357 aaKnown RBP13.27□□□□□ -0.29
RPAIN-202ENST00000381208 ERN2Q76MJ5 926 aaKnown RBP13.27□□□□□ -0.29
RPAIN-202ENST00000381208 STRADAQ7RTN6 431 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 HORMAD1Q86X24 394 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 FAM131BQ86XD5 332 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 DCP2Q8IU60 420 aaKnown RBP13.27□□□□□ -0.29
RPAIN-202ENST00000381208 KLHDC7BQ96G42 594 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 LRIG1Q96JA1 1093 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 CNDP2Q96KP4 475 aaKnown RBP13.27□□□□□ -0.29
RPAIN-202ENST00000381208 CFAP57Q96MR6 1250 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 SPON2Q9BUD6 331 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 OSBPL2Q9H1P3 480 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 VPS16Q9H269 839 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 METTL5Q9NRN9 209 aaKnown RBP13.27□□□□□ -0.29
RPAIN-202ENST00000381208 LMBRD1Q9NUN5 540 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 IL36AQ9UHA7 158 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 NOCTQ9UK39 431 aaKnown RBP13.27□□□□□ -0.29
RPAIN-202ENST00000381208 ZFHX4Q86UP3 3567 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 AKAP13Q12802 2813 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 CACNA1GO43497 2377 aa13.27□□□□□ -0.29
RPAIN-202ENST00000381208 GOLGA8CPA6NN73 597 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-202ENST00000381208 CBX4O00257 560 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 CALB1P05937 261 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 CCDC172P0C7W6 258 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 RRM1P23921 792 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 MAT2AP31153 395 aaKnown RBP13.26□□□□□ -0.29
RPAIN-202ENST00000381208 PTPN9P43378 593 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 NSFP46459 744 aaKnown RBP13.26□□□□□ -0.29
RPAIN-202ENST00000381208 NUMBP49757 651 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 SERPINH1P50454 418 aaKnown RBP13.26□□□□□ -0.29
RPAIN-202ENST00000381208 METAP1P53582 386 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 JAM2P57087 298 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 GNA12Q03113 381 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 SHBQ15464 509 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 GATAD2AQ86YP4 633 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 ISG20Q96AZ6 181 aaKnown RBP13.26□□□□□ -0.29
RPAIN-202ENST00000381208 HEPHQ9BQS7 1158 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 ATP13A1Q9HD20 1204 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 FAM207AQ9NSI2 230 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-202ENST00000381208 ZNF212Q9UDV6 495 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 OR12D3Q9UGF7 316 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 HPCAL4Q9UM19 191 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 ZFYVE26Q68DK2 2539 aa13.26□□□□□ -0.29
RPAIN-202ENST00000381208 A0A1W2PQU0 124 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 ANKRD62A6NC57 917 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-202ENST00000381208 WNT9AO14904 365 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 SMAD6O43541 496 aaKnown RBP13.25□□□□□ -0.29
RPAIN-202ENST00000381208 RFPL3O75679 317 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 ZMPSTE24O75844 475 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 CTSLP07711 333 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 KRT3P12035 628 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 RHOQP17081 205 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 DESP17661 470 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 HNRNPA2B1P22626 353 aaKnown RBP13.25□□□□□ -0.29
RPAIN-202ENST00000381208 ADRA1BP35368 520 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 NEK3P51956 506 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 TAS2R38P59533 333 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 ATP11AP98196 1134 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 FMO1Q01740 532 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 MYL5Q02045 173 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 POM121L1PQ3SYA9 428 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 CARD16Q5EG05 197 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 ARSIQ5FYB1 569 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 PRAMEF14Q5SWL7 426 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 KIAA1161Q6NSJ0 714 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 PPP1R2P3Q6NXS1 205 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 DPY19L3Q6ZPD9 716 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 OR7D4Q8NG98 312 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 NTAN1Q96AB6 310 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 RAB7BQ96AH8 199 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 IFT43Q96FT9 208 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 MAGEH1Q9H213 219 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 KLHL11Q9NVR0 708 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 DONSONQ9NYP3 566 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 SNX10Q9Y5X0 201 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-202ENST00000381208 ZZEF1O43149 2961 aa13.25□□□□□ -0.29
RPAIN-202ENST00000381208 LRRC10BA6NIK2 292 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 C2CD4BA6NLJ0 364 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 LGALS16A8MUM7 142 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 K7ERQ8 282 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 TAF4O00268 1085 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 PLK4O00444 970 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 AP1G1O43747 822 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 URB1O60287 2271 aaKnown RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 LEFTY1O75610 366 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 PCDH8O95206 1070 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 UNGP13051 313 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-202ENST00000381208 CKMT2P17540 419 aa13.24□□□□□ -0.29
RPAIN-202ENST00000381208 ITGB7P26010 798 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms