RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 FAM183BPQ6ZVS7 135 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 ABI3BPQ7Z7G0 1075 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 ZSCAN30Q86W11 494 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 PASD1Q8IV76 773 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 DCAF4L2Q8NA75 395 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 MAPK15Q8TD08 544 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 ARRDC3Q96B67 414 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 WBP1Q96G27 269 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 HIC2Q96JB3 615 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 SRRTQ9BXP5 876 aaKnown RBP16.36■□□□□ 0.21
VCX3A-201ENST00000381089 DPH1Q9BZG8 443 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 WDCPQ9H6R7 721 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 VPS51Q9UID3 782 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 STAP1Q9ULZ2 295 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 PCDHGC3Q9UN70 934 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 HS3ST3A1Q9Y663 406 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 ASH1LQ9NR48 2969 aaKnown RBP16.36■□□□□ 0.21
VCX3A-201ENST00000381089 TDRD6O60522 2096 aaKnown RBP16.36■□□□□ 0.21
VCX3A-201ENST00000381089 PPP1R3GB7ZBB8 358 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 SNAP91O60641 907 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 MT-CO1P00395 513 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 RRM1P23921 792 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 KRT9P35527 623 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 GGCXP38435 758 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 IRAK1P51617 712 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 NEK3P51956 506 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 CLDN2P57739 230 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 RPS21P63220 83 aaKnown RBP16.35■□□□□ 0.21
VCX3A-201ENST00000381089 SLC6A3Q01959 620 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 PTK2Q05397 1052 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 ARSIQ5FYB1 569 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 SMYD5Q6GMV2 418 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 RETSATQ6NUM9 610 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 ZCCHC8Q6NZY4 707 aaKnown RBP16.35■□□□□ 0.21
VCX3A-201ENST00000381089 TRIM65Q6PJ69 517 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 GCNT7Q6ZNI0 430 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 SLC26A9Q7LBE3 791 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 ZDHHC17Q8IUH5 632 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 GRIN3AQ8TCU5 1115 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 FEM1CQ96JP0 617 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 TKTL2Q9H0I9 626 aa16.35■□□□□ 0.21
VCX3A-201ENST00000381089 IPO11Q9UI26 975 aaKnown RBP16.35■□□□□ 0.21
VCX3A-201ENST00000381089 K7ESM1 405 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 ADCY5O95622 1261 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 F9P00740 461 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 RBMS1P29558 406 aaKnown RBP16.34■□□□□ 0.21
VCX3A-201ENST00000381089 RABIFP47224 123 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 STX17P56962 302 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
VCX3A-201ENST00000381089 ARHGAP40Q5TG30 622 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 SEL1L3Q68CR1 1132 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 C22orf39Q6P5X5 142 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 KYAT3Q6YP21 454 aaKnown RBP16.34■□□□□ 0.21
VCX3A-201ENST00000381089 GBP6Q6ZN66 633 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 C14orf80Q86SX3 495 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 PARGQ86W56 976 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 CREBRFQ8IUR6 639 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 SLC22A18ASQ8N1D0 253 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
VCX3A-201ENST00000381089 TPCN2Q8NHX9 752 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 IFI44Q8TCB0 444 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 CCDC97Q96F63 343 aaPredicted RBP16.34■□□□□ 0.21
VCX3A-201ENST00000381089 PSMB7Q99436 277 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 SLC17A9Q9BYT1 436 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 OSBPL2Q9H1P3 480 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 ARHGEF38Q9NXL2 777 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.34■□□□□ 0.21
VCX3A-201ENST00000381089 APEX2Q9UBZ4 518 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 MGAQ8IWI9 3026 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 ZNF462Q96JM2 2506 aa16.34■□□□□ 0.21
VCX3A-201ENST00000381089 J3QKU1 62 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 K7ERQ8 282 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 KLK10O43240 276 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 LEFTY1O75610 366 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 CNTN5O94779 1100 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 GIMD1P0DJR0 217 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 OR1E1P30953 314 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 SULT1E1P49888 294 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 SLC20A2Q08357 652 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 SGCGQ13326 291 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 MORC3Q14149 939 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 TMEM259Q4ZIN3 620 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 ALFQ53S48 1182 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 LINGO4Q6UY18 593 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 ZNF783Q6ZMS7 281 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 WDTC1Q8N5D0 677 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 CHST14Q8NCH0 376 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
VCX3A-201ENST00000381089 ZNF397Q8NF99 534 aaPredicted RBP16.33■□□□□ 0.2
VCX3A-201ENST00000381089 GLMNQ92990 594 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 COL26A1Q96A83 441 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 CEP44Q9C0F1 390 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 TNKS2Q9H2K2 1166 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 PIGVQ9NUD9 493 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 ZFR2Q9UPR6 939 aaKnown RBP16.33■□□□□ 0.2
VCX3A-201ENST00000381089 CSNK1G3Q9Y6M4 447 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms