RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 SCOCQ9UIL1 159 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 SSX2IPQ9Y2D8 614 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ACOT9Q9Y305 439 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 KCTD3Q9Y597 815 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 DPYSL4O14531 572 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 CD1EP15812 388 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 PRKCHP24723 683 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 MRPS22P82650 360 aaKnown RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ARL13AQ5H913 290 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 TEDDM1Q5T9Z0 273 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 KIAA1841Q6NSI8 718 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 CYP2R1Q6VVX0 501 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 GET4Q7L5D6 327 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 C14orf80Q86SX3 495 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ESAMQ96AP7 390 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 SLC39A8Q9C0K1 460 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 PLAC1Q9HBJ0 212 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 FAM50BQ9Y247 325 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ACTL7AQ9Y615 435 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 GON4LQ3T8J9 2241 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 FAM95CA0A1B0GW59 222 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ERI2A8K979 691 aaKnown RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 PEX1O43933 1283 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 GJB3O75712 270 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 STMN1P16949 149 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 RPL17P18621 184 aaKnown RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 TPSB2P20231 275 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 FGFR3P22607 806 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 SLC34A1Q06495 639 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 GALNT3Q14435 633 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 TPSAB1Q15661 275 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 KCNA10Q16322 511 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ACAD11Q709F0 780 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ZNF280BQ86YH2 543 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ARNTL2Q8WYA1 636 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 LENG8Q96PV6 779 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 FBXW11Q9UKB1 542 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 ANGPTL2Q9UKU9 493 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 PPM1HQ9ULR3 514 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 TLL2Q9Y6L7 1015 aa11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 TRIP12Q14669 1992 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 KIAA0100Q14667 2235 aaKnown RBP11.12□□□□□ -0.63
DNMT3A-203ENST00000380746 GPR182O15218 404 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 GATMP50440 423 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 DSC2Q02487 901 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CRHR2Q13324 411 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 RIPK1Q13546 671 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ZBTB6Q15916 424 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CTXN3Q4LDR2 81 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 NAPRTQ6XQN6 538 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 OR10T2Q8NGX3 314 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 FBXO32Q969P5 355 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ERLEC1Q96DZ1 483 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CPNE1Q99829 537 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 MTG1Q9BT17 334 aaPredicted RBP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 GPAMQ9HCL2 828 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 DSEQ9UL01 958 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 COL1A2P08123 1366 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 J3KR12 359 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 FYNP06241 537 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 IDH3AP50213 366 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 PAPOLAP51003 745 aaKnown RBP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 PURAQ00577 322 aaKnown RBP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ZNF235Q14590 738 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 PCLAFQ15004 111 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 RNF220Q5VTB9 566 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 SEL1L3Q68CR1 1132 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CNSTQ6PJW8 725 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 C16orf59Q7L2K0 433 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 GCNAQ96QF7 691 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 NPAS2Q99743 824 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 TBL1YQ9BQ87 522 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 SEMA6AQ9H2E6 1030 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 VCXQ9H320 206 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ALG9Q9H6U8 611 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ZFYVE28Q9HCC9 887 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 AP2A1O95782 977 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CHRNA1P02708 482 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CCDC166P0CW27 439 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 GFAPP14136 432 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ITGB6P18564 788 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 DNAJB2P25686 324 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 SCNN1BP51168 640 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 TAZQ16635 292 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 WLSQ5T9L3 541 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 TAF2Q6P1X5 1199 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 KYAT3Q6YP21 454 aaKnown RBP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 TRIM74Q86UV6 250 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 TRIM73Q86UV7 250 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 ICA1LQ8NDH6 482 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 SKA2Q8WVK7 121 aaPredicted RBP11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 MIEF2Q96C03 454 aa11.11□□□□□ -0.63
DNMT3A-203ENST00000380746 CNGB3Q9NQW8 809 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms