RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 KLHDC7BQ96G42 594 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 FZD3Q9NPG1 666 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 SCUBE2Q9NQ36 999 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 DYRK4Q9NR20 520 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 TMEM51Q9NW97 253 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 CHMP5Q9NZZ3 219 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 TMEM59LQ9UK28 342 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 FASNP49327 2511 aaKnown RBP17.24■□□□□ 0.35
SMN2-201ENST00000380741 CHD5Q8TDI0 1954 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 ZNF821O75541 412 aaPredicted RBP17.23■□□□□ 0.35
SMN2-201ENST00000380741 ENDOD1O94919 500 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 MMEP08473 750 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 THEGLP0DJG4 465 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 CCDC15Q0P6D6 951 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 ZNF284Q2VY69 593 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 ARSIQ5FYB1 569 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 TCP11X2Q5H9J9 407 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 HES3Q5TGS1 186 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 NEK5Q6P3R8 708 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 FBXL19Q6PCT2 694 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 ZNF783Q6ZMS7 281 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 DPY19L3Q6ZPD9 716 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 MSANTD4Q8NCY6 345 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 EPS8L1Q8TE68 723 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 HAPLN3Q96S86 360 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 SPON2Q9BUD6 331 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 STK33Q9BYT3 514 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 ZYG11BQ9C0D3 744 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 NUP62CLQ9H1M0 184 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 IL36AQ9UHA7 158 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 WASF2Q9Y6W5 498 aa17.23■□□□□ 0.35
SMN2-201ENST00000380741 ILVBLA1L0T0 632 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 LEFTY1O75610 366 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 ZMPSTE24O75844 475 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 CKMT2P17540 419 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 RECQLP46063 649 aaPredicted RBP17.22■□□□□ 0.35
SMN2-201ENST00000380741 SERPINH1P50454 418 aaKnown RBP17.22■□□□□ 0.35
SMN2-201ENST00000380741 TARDBPQ13148 414 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMN2-201ENST00000380741 PROX2Q3B8N5 592 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 RETSATQ6NUM9 610 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 ERN2Q76MJ5 926 aaKnown RBP17.22■□□□□ 0.35
SMN2-201ENST00000380741 SLC25A45Q8N413 288 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 EMC1Q8N766 993 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 NXPE2Q96DL1 559 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 HDAC8Q9BY41 377 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 ATP13A1Q9HD20 1204 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 METTL5Q9NRN9 209 aaKnown RBP17.22■□□□□ 0.35
SMN2-201ENST00000380741 TAB2Q9NYJ8 693 aa17.22■□□□□ 0.35
SMN2-201ENST00000380741 ZFR2Q9UPR6 939 aaKnown RBP17.22■□□□□ 0.35
SMN2-201ENST00000380741 BPTFQ12830 3046 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 TRIM38O00635 465 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 SIGLEC6O43699 453 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 PCDH8O95206 1070 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 HNRNPA2B1P22626 353 aaKnown RBP17.21■□□□□ 0.35
SMN2-201ENST00000380741 EEF1GP26641 437 aaKnown RBP17.21■□□□□ 0.35
SMN2-201ENST00000380741 ARF5P84085 180 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 ATP11AP98196 1134 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 GNA12Q03113 381 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 ILKQ13418 452 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 RAB6CQ53S08 254 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 SEL1L3Q68CR1 1132 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 ARCQ7LC44 396 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 DRC7Q8IY82 874 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 SLC20A1Q8WUM9 679 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 PPP1R16AQ96I34 528 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 LRIG1Q96JA1 1093 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 CEP44Q9C0F1 390 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 RAB6CQ9H0N0 254 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 CAAP1Q9H8G2 361 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 NOCTQ9UK39 431 aaKnown RBP17.21■□□□□ 0.35
SMN2-201ENST00000380741 ACTL7AQ9Y615 435 aa17.21■□□□□ 0.35
SMN2-201ENST00000380741 A0A087WV48 116 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 DGKAP23743 735 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 ACP1P24666 158 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 AKT2P31751 481 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 CLDN2P57739 230 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 ZNF211Q13398 564 aaPredicted RBP17.2■□□□□ 0.34
SMN2-201ENST00000380741 CDO1Q16878 200 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 TMEM259Q4ZIN3 620 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 GCNT7Q6ZNI0 430 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 ZNF677Q86XU0 584 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 SLC22A18ASQ8N1D0 253 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 PCDH20Q8N6Y1 951 aaKnown RBP17.2■□□□□ 0.34
SMN2-201ENST00000380741 OR13H1Q8NG92 308 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 CALN1Q9BXU9 219 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 GANQ9H2C0 597 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 KLHL11Q9NVR0 708 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 UCKL1Q9NWZ5 548 aa17.2■□□□□ 0.34
SMN2-201ENST00000380741 PPARGC1AQ9UBK2 798 aaKnown RBP17.2■□□□□ 0.34
SMN2-201ENST00000380741 FCF1Q9Y324 198 aaKnown RBP17.2■□□□□ 0.34
SMN2-201ENST00000380741 GFPT2O94808 682 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 CD160O95971 181 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 ADRB3P13945 408 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 CHRNB2P17787 502 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 MMP8P22894 467 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 ITGB7P26010 798 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 KLK7P49862 253 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 DNA2P51530 1060 aa17.19■□□□□ 0.34
SMN2-201ENST00000380741 CCNHP51946 323 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms