RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 GMCL1Q96IK5 515 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 TXNDC15Q96J42 360 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 SLC4A9Q96Q91 983 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 COQ7Q99807 217 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 MXRA8Q9BRK3 442 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 DNAI2Q9GZS0 605 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 RNF38Q9H0F5 515 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 RPAP3Q9H6T3 665 aaPredicted RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 WDR55Q9H6Y2 383 aaPredicted RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 GIMAP4Q9NUV9 329 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 TBC1D13Q9NVG8 400 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 TMEM216Q9P0N5 145 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 ZNF221Q9UK13 617 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 MTF2Q9Y483 593 aaPredicted RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 NUP98P52948 1817 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 ADGRA2Q96PE1 1338 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 BBIP1A8MTZ0 92 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 TTC34A8MYJ7 566 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 RNF103O00237 685 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 UBDO15205 165 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 CABYRO75952 493 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 LDLRP01130 860 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 ERBB2P04626 1255 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 RPS9P46781 194 aaKnown RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 SLC25A11Q02978 314 aaKnown RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 POLD3Q15054 466 aaPredicted RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 SF3B4Q15427 424 aaKnown RBP eCLIP7.36□□□□□ -1.23
DDX58-202ENST00000379883 PGS1Q32NB8 556 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 TTC23Q5W5X9 447 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 HACD2Q6Y1H2 254 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 RNF19BQ6ZMZ0 732 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 CDR2LQ86X02 465 aaPredicted RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 PLD3Q8IV08 490 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 GMCL1P1Q8NEA9 526 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 HOPXQ9BPY8 73 aaPredicted RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 TASP1Q9H6P5 420 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 NANOGQ9H9S0 305 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 PCDH12Q9NPG4 1184 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 SNX15Q9NRS6 342 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 CCM2LQ9NUG4 571 aaPredicted RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 PKD2L1Q9P0L9 805 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 AGO2Q9UKV8 859 aaKnown RBP7.36□□□□□ -1.23
DDX58-202ENST00000379883 EMCNQ9ULC0 261 aa7.36□□□□□ -1.23
DDX58-202ENST00000379883 SCN7AQ01118 1682 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 A0A1B0GTW7 788 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 C3orf70A6NLC5 250 aaPredicted RBP7.35□□□□□ -1.23
DDX58-202ENST00000379883 SOCS2O14508 198 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 MSI1O43347 362 aaKnown RBP7.35□□□□□ -1.23
DDX58-202ENST00000379883 LRCH4O75427 683 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 DDHD2O94830 711 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 CPNE6O95741 557 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 UGT2B4P06133 528 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 TFEBP19484 476 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 ENDOUP21128 410 aaKnown RBP7.35□□□□□ -1.23
DDX58-202ENST00000379883 ACO1P21399 889 aaKnown RBP7.35□□□□□ -1.23
DDX58-202ENST00000379883 OPRL1P41146 370 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 GPD2P43304 727 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 ECT2LQ008S8 904 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 TNK2Q07912 1038 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 VAC14Q08AM6 782 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 MMRN1Q13201 1228 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 SKIV2LQ15477 1246 aaKnown RBP7.35□□□□□ -1.23
DDX58-202ENST00000379883 WDR45BQ5MNZ6 344 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 CYP4A22Q5TCH4 519 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 CES4AQ5XG92 561 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 TATDN1Q6P1N9 297 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 DDIASQ8IXT1 998 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 C4orf19Q8IY42 314 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 SDR16C5Q8N3Y7 309 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 TMEM161BQ8NDZ6 487 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 PGBD4Q96DM1 585 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 RTP4Q96DX8 246 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 VMP1Q96GC9 406 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 FEM1CQ96JP0 617 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 CGRRF1Q99675 332 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 CNPY3Q9BT09 278 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 NEK6Q9HC98 313 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.35□□□□□ -1.23
DDX58-202ENST00000379883 RBAKQ9NYW8 714 aaPredicted RBP7.35□□□□□ -1.23
DDX58-202ENST00000379883 MOCS1Q9NZB8 636 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 ST14Q9Y5Y6 855 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 COL5A2P05997 1499 aaPredicted RBP7.35□□□□□ -1.23
DDX58-202ENST00000379883 A0A096LPK6 155 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 LOC102724428A0A0B4J2F2 783 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 WDR27A2RRH5 827 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 ARHGEF9O43307 516 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 KRT19P08727 400 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 UMPSP11172 480 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 GSTM2P28161 218 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 MIPP30301 263 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 MAPK10P53779 464 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 SIK1P57059 783 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 COPZ1P61923 177 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 CDC20Q12834 499 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 AGKQ53H12 422 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 UGT3A1Q6NUS8 523 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 TUBA3EQ6PEY2 450 aa7.35□□□□□ -1.23
DDX58-202ENST00000379883 CAND1Q86VP6 1230 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms