RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CRLF3Q8IUI8 442 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 UNC5BQ8IZJ1 945 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 PPHLN1Q8NEY8 458 aaKnown RBP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 DBF4BQ8NFT6 615 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 MAGEC3Q8TD91 643 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 BTN2A3PQ96KV6 586 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 FCRL3Q96P31 734 aaPredicted RBP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 ASB2Q96Q27 587 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 TMEM237Q96Q45 408 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 LRMDAQ9H2I8 198 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 ZNF576Q9H609 170 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 TMEM248Q9NWD8 314 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 PIH1D1Q9NWS0 290 aaKnown RBP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 MARCH5Q9NX47 278 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 GMIPQ9P107 970 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 MID2Q9UJV3 735 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 NYNRINQ9P2P1 1898 aaKnown RBP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 DOCK4Q8N1I0 1966 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 GREB1Q4ZG55 1949 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 MTMR11A4FU01 709 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 ATP9BO43861 1147 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 TBC1D4O60343 1298 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 PLIN3O60664 434 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 USP12O75317 370 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 MOCS2O96007 188 aaPredicted RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 DLDP09622 509 aaKnown RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 HAPLN1P10915 354 aaPredicted RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC11A1P49279 550 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 BST1Q10588 318 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 STX3Q13277 289 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 HNRNPDQ14103 355 aaKnown RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 CHI3L2Q15782 390 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 CERCAMQ5T4B2 595 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 N4BP2L1Q5TBK1 243 aaPredicted RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 PIK3R6Q5UE93 754 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 STRA8Q7Z7C7 330 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 CEP57Q86XR8 500 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 ZNF683Q8IZ20 524 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 RFWD2Q8NHY2 731 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 PPP1R14CQ8TAE6 165 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 GABPB2Q8TAK5 448 aaPredicted RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 USP33Q8TEY7 942 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 NSMCE1Q8WV22 266 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 SREK1Q8WXA9 508 aaKnown RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 THOC1Q96FV9 657 aaKnown RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 TMEM120AQ9BXJ8 343 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 PRKD2Q9BZL6 878 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC25A51Q9H1U9 297 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 STN1Q9H668 368 aaKnown RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 SNX15Q9NRS6 342 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 VPS45Q9NRW7 570 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 C20orf96Q9NUD7 363 aaPredicted RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 THAP1Q9NVV9 213 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 OSER1Q9NX31 292 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 IPO11Q9UI26 975 aaKnown RBP10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 LNPEPQ9UIQ6 1025 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 ANKRD6Q9Y2G4 727 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 PSAT1Q9Y617 370 aa10.65□□□□□ -0.71
POLR2J3-201ENST00000379340 CHD9Q3L8U1 2897 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 TTC3P53804 2025 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 A0A0G2JND7 137 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 TRAFD1O14545 582 aaPredicted RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 H2AFYO75367 372 aaKnown RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 HAUS5O94927 633 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 IGLV3-27P01718 113 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 APOA4P06727 396 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 PAMP19021 973 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 GRK2P25098 689 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 ADRA1AP35348 466 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 MAPKAPK2P49137 400 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 GPR15P49685 360 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 PGFP49763 221 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 PAPOLAP51003 745 aaKnown RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 RENBPP51606 427 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 USP46P62068 366 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 EFEMP1Q12805 493 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 OVGP1Q12889 678 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 ILF2Q12905 390 aaKnown RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 OLIG2Q13516 323 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 CCDC85BQ15834 202 aaPredicted RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 FASTKD1Q53R41 847 aaKnown RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 MS4A13Q5J8X5 152 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 PKN3Q6P5Z2 889 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 ARHGAP36Q6ZRI8 547 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 OTOP3Q7RTS5 596 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 CLNKQ7Z7G1 428 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 C14orf80Q86SX3 495 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 CNTN4Q8IWV2 1026 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 DCLK2Q8N568 766 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 OVCA2Q8WZ82 227 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 SKA1Q96BD8 255 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 TIFAQ96CG3 184 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 UHRF1Q96T88 793 aaPredicted RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 MCMBPQ9BTE3 642 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 GPR62Q9BZJ7 368 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 WWP1Q9H0M0 922 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 KCNK13Q9HB14 408 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms