RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 E5RJQ4 531 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 FSHRP23945 695 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 GRK2P25098 689 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 PSMD8P48556 350 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 NME5P56597 212 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 RAP1GAP2Q684P5 730 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 ACTL9Q8TC94 416 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 SPPL2BQ8TCT7 592 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 ACTRT1Q8TDG2 376 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 PPP1R14AQ96A00 147 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 CLIP3Q96DZ5 547 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 ANKRD27Q96NW4 1050 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 ULBP1Q9BZM6 244 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 ATP13A3Q9H7F0 1226 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 MIEF1Q9NQG6 463 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 WHRNQ9P202 907 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 TOPAZ1Q8N9V7 1692 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 SLC2A4P14672 509 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 NOS2P35228 1153 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 SOX6P35712 828 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 MARCKSL1P49006 195 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 ELF3P78545 371 aaPredicted RBP10.96□□□□□ -0.65
HIF3A-205ENST00000377670 PLIN5Q00G26 463 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 DUSP4Q13115 394 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 CYP2A13Q16696 494 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 SPOCD1Q6ZMY3 1216 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 TRIM69Q86WT6 500 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 SLC44A2Q8IWA5 706 aaPredicted RBP10.96□□□□□ -0.65
HIF3A-205ENST00000377670 OR8H2Q8N162 312 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 C12orf29Q8N999 325 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 MYLPFQ96A32 169 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 ECSITQ9BQ95 431 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 LRCH1Q9Y2L9 728 aa10.96□□□□□ -0.65
HIF3A-205ENST00000377670 COL1A2P08123 1366 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 IGKV6D-41A0A0C4DH26 115 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 C1orf232A0A0U1RR37 186 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 E9PBE3 544 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 KLHL41O60662 606 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 RFC2P35250 354 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 PEX5P50542 639 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 C15orf59Q2T9L4 293 aaPredicted RBP10.96□□□□□ -0.66
HIF3A-205ENST00000377670 CACHD1Q5VU97 1274 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 DENND1BQ6P3S1 775 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 LRRC74BQ6ZQY2 392 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.66
HIF3A-205ENST00000377670 KREMEN2Q8NCW0 462 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 TNIP2Q8NFZ5 429 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 UNKQ9C0B0 810 aaKnown RBP10.96□□□□□ -0.66
HIF3A-205ENST00000377670 UNC93B1Q9H1C4 597 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 EFCAB1Q9HAE3 211 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 CYLDQ9NQC7 956 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 DNPEPQ9ULA0 475 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 EIF3LQ9Y262 564 aaKnown RBP10.96□□□□□ -0.66
HIF3A-205ENST00000377670 PTPRJQ12913 1337 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 GSNP06396 782 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 ATP4AP20648 1035 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 ADARP55265 1226 aaKnown RBP10.96□□□□□ -0.66
HIF3A-205ENST00000377670 PPIDQ08752 370 aaKnown RBP10.96□□□□□ -0.66
HIF3A-205ENST00000377670 KRR1Q13601 381 aaKnown RBP10.96□□□□□ -0.66
HIF3A-205ENST00000377670 MEA1Q16626 185 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 ARHGAP17Q68EM7 881 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 PDPK2PQ6A1A2 396 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 C11orf63Q6NUN7 778 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 GLT6D1Q7Z4J2 308 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 ZSCAN1Q8NBB4 408 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 CLEC4DQ8WXI8 215 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 BAP1Q92560 729 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 PANX3Q96QZ0 392 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 CDT1Q9H211 546 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 RAB21Q9UL25 225 aa10.96□□□□□ -0.66
HIF3A-205ENST00000377670 MYH2Q9UKX2 1941 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 ABCC6O95255 1503 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-205ENST00000377670 GLRA3O75311 464 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 MFSD7Q6UXD7 560 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-205ENST00000377670 LRRC6Q86X45 466 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 RASAL3Q86YV0 1011 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 DBF4BQ8NFT6 615 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 BRI3BPQ8WY22 251 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 C18orf25Q96B23 403 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-205ENST00000377670 PAFAH2Q99487 392 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 BTBD10Q9BSF8 475 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 GANQ9H2C0 597 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 TRIT1Q9H3H1 467 aaKnown RBP10.95□□□□□ -0.66
HIF3A-205ENST00000377670 RERGLQ9H628 205 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 POPDC2Q9HBU9 364 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 TMA7Q9Y2S6 64 aaKnown RBP10.95□□□□□ -0.66
HIF3A-205ENST00000377670 TLL2Q9Y6L7 1015 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 RPIAP49247 311 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 CCINQ13939 588 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 ANGPT1Q15389 498 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 DDR2Q16832 855 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 ISLR2Q6UXK2 745 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 FUKQ8N0W3 1084 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 SMAD5Q99717 465 aaKnown RBP10.95□□□□□ -0.66
HIF3A-205ENST00000377670 GOLGA2P5Q9HBQ8 144 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 DIABLOQ9NR28 239 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF446Q9NWS9 450 aa10.95□□□□□ -0.66
HIF3A-205ENST00000377670 TRDMT1O14717 391 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms