RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 MAMLD1Q13495 774 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 CNGA2Q16280 664 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 STXBP5Q5T5C0 1151 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 C1orf186Q6ZWK4 172 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 NKAPQ8N5F7 415 aaKnown RBP19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 SLC9A3R1O14745 358 aaPredicted RBP19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 PTPRAP18433 802 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 TOMM20Q15388 145 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 CENPIQ92674 756 aaPredicted RBP19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 REXO4Q9GZR2 422 aaKnown RBP19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 PRKAG1P54619 331 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 PKNOX1P55347 436 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 ITGA1P56199 1179 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 VGLL4Q14135 290 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 EPS8L1Q8TE68 723 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 GINS4Q9BRT9 223 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 CEP44Q9C0F1 390 aa19.24■□□□□ 0.67
TBC1D4-201ENST00000377625 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.24■□□□□ 0.674e-8■□□□□ 9.4
TBC1D4-201ENST00000377625 BUD23O43709 281 aaKnown RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 RPA3P35244 121 aaPredicted RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 POLD2P49005 469 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 PFKPQ01813 784 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 KIAA0319LQ8IZA0 1049 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 RGL4Q8IZJ4 473 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 KAT5Q92993 513 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 COL26A1Q96A83 441 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 PGM2Q96G03 612 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 FHDC1Q9C0D6 1143 aaPredicted RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 SNX6Q9UNH7 406 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 AP3M1Q9Y2T2 418 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 CABYRO75952 493 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 COPZ1P61923 177 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 ZNF276Q8N554 614 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 SF3B1O75533 1304 aaKnown RBP eCLIP19.23■□□□□ 0.676e-6■■■■■ 103.4
TBC1D4-201ENST00000377625 CCDC166P0CW27 439 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 UQCRBP14927 111 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 GLRA2P23416 452 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 CRADDP78560 199 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 TAF13Q15543 124 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 CLVS1Q8IUQ0 354 aaPredicted RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 ZNF558Q96NG5 402 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 TINF2Q9BSI4 451 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 DCUN1D5Q9BTE7 237 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 FBXO6Q9NRD1 293 aaPredicted RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 ATAD3AQ9NVI7 634 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 KCNK4Q9NYG8 393 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 MAP10Q9P2G4 905 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 LRRC14BA6NHZ5 514 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 CALCAP01258 141 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 TLX1P31314 330 aaPredicted RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 ZNF143P52747 638 aaPredicted RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 LRRC74BQ6ZQY2 392 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 PCDH20Q8N6Y1 951 aaKnown RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 AENQ8WTP8 325 aaKnown RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 COPS5Q92905 334 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 C18orf25Q96B23 403 aaPredicted RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 PCDHA11Q9Y5I1 949 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 MARSP56192 900 aaKnown RBP19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 ASZ1Q8WWH4 475 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 UBE2E3Q969T4 207 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 MTMR9Q96QG7 549 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 PSME2Q9UL46 239 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
TBC1D4-201ENST00000377625 SCAMP3O14828 347 aaKnown RBP19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 AADACL2Q6P093 401 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 ZBTB10Q96DT7 871 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 TEKT5Q96M29 485 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 TRAPPC9Q96Q05 1148 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 TMEM216Q9P0N5 145 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 LMTK2Q8IWU2 1503 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 A0A0B4J269 797 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 CCDC189A1A4V9 331 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 SGTAO43765 313 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 OR6B1O95007 311 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 ABL2P42684 1182 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 PTSQ03393 145 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 FBXO30Q8TB52 745 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 S100A13Q99584 98 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 SAR1AQ9NR31 198 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 HLA-DQA2P01906 255 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 SOHLH2Q9NX45 425 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 TAS2R14Q9NYV8 317 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 ANAPC2Q9UJX6 822 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 CDH9Q9ULB4 789 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 AGRPO00253 132 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 NTRK1P04629 796 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 AMD1P17707 334 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 HDCP19113 662 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 ATP1A4Q13733 1029 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 IZUMO1Q8IYV9 350 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 VAV3Q9UKW4 847 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 CHKBQ9Y259 395 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 HES2Q9Y543 173 aa19.22■□□□□ 0.67
TBC1D4-201ENST00000377625 TBX2Q13207 712 aaPredicted RBP19.21■□□□□ 0.67
TBC1D4-201ENST00000377625 UNC5AQ6ZN44 842 aa19.21■□□□□ 0.67
TBC1D4-201ENST00000377625 PTGR2Q8N8N7 351 aaPredicted RBP19.21■□□□□ 0.67
TBC1D4-201ENST00000377625 CARNS1A5YM72 827 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms