RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 NCKIPSDQ9NZQ3 722 aa15.07■□□□□ 0
HDAC6-204ENST00000376643 PLXNB3Q9ULL4 1909 aa15.07■□□□□ 0
HDAC6-204ENST00000376643 EIF4E1BA6NMX2 242 aaKnown RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 H3BM21 787 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 GOLGA8SH3BPF8 625 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 PLK4O00444 970 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 SLC31A1O15431 190 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 AP1G1O43747 822 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 MT-CO1P00395 513 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 PNMA6AP0CW24 399 aaPredicted RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 RRM1P23921 792 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 FLT3P36888 993 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 ABCG1P45844 678 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 NUMBP49757 651 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 DUSP3P51452 185 aaPredicted RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 METAP1P53582 386 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 TAS2R38P59533 333 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 NRG1Q02297 640 aaPredicted RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 GNA12Q03113 381 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 KCNMA1Q12791 1236 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 DNAJC3Q13217 504 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 POLD3Q15054 466 aaPredicted RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 TAF3Q5VWG9 929 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 C19orf48Q6RUI8 117 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 GRIN3AQ8TCU5 1115 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 EPS8L1Q8TE68 723 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 ISG20Q96AZ6 181 aaKnown RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 NAA15Q9BXJ9 866 aaKnown RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 MPP6Q9NZW5 540 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 TMEM59LQ9UK28 342 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 AJAP1Q9UKB5 411 aaPredicted RBP15.06■□□□□ 0
HDAC6-204ENST00000376643 CLCA2Q9UQC9 943 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 HS3ST3A1Q9Y663 406 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 AK5Q9Y6K8 562 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 APC2O95996 2303 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 ZFYVE26Q68DK2 2539 aa15.06■□□□□ 0
HDAC6-204ENST00000376643 GOLGA4Q13439 2230 aaKnown RBP15.05■□□□□ 0
HDAC6-204ENST00000376643 DMXL2Q8TDJ6 3036 aa15.05■□□□□ 0
HDAC6-204ENST00000376643 A0A0D9SEW6 157 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ -0
HDAC6-204ENST00000376643 LEFTY1O75610 366 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 CTSLP07711 333 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 L1CAMP32004 1257 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 HNRNPKP61978 463 aaKnown RBP eCLIP15.05■□□□□ -0
HDAC6-204ENST00000376643 NOMO3P69849 1222 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 BNIP3Q12983 259 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 RTP5Q14D33 572 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 SYCP1Q15431 976 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 ZNF284Q2VY69 593 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 CARD16Q5EG05 197 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 ARSIQ5FYB1 569 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 NAA35Q5VZE5 725 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 DPY19L3Q6ZPD9 716 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 STRADAQ7RTN6 431 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 KANSL1Q7Z3B3 1105 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 BNIPLQ7Z465 357 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 ABI3BPQ7Z7G0 1075 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 NOP9Q86U38 636 aaKnown RBP15.05■□□□□ -0
HDAC6-204ENST00000376643 FAM131BQ86XD5 332 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 OR4C6Q8NH72 309 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 HNRNPLLQ8WVV9 542 aaKnown RBP15.05■□□□□ -0
HDAC6-204ENST00000376643 CFAP57Q96MR6 1250 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 CALN1Q9BXU9 219 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 OSBPL1AQ9BXW6 950 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 DONSONQ9NYP3 566 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 KNTC1P50748 2209 aa15.05■□□□□ -0
HDAC6-204ENST00000376643 SPEGQ15772 3267 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 ATRXP46100 2492 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 TP53BP1Q12888 1972 aaPredicted RBP15.04■□□□□ -0
HDAC6-204ENST00000376643 ANKRD62A6NC57 917 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 K7ERQ8 282 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 TSPAN6O43657 245 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 ENDOD1O94919 500 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 GP1BAP07359 652 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 ADRB3P13945 408 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 TFE3P19532 575 aaPredicted RBP15.04■□□□□ -0
HDAC6-204ENST00000376643 DGKAP23743 735 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 ACTN2P35609 894 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 RABIFP47224 123 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 DNA2P51530 1060 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 SNRPD1P62314 119 aaKnown RBP15.04■□□□□ -0
HDAC6-204ENST00000376643 CDR2Q01850 454 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 RAD51Q06609 339 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 TARDBPQ13148 414 aaKnown RBP eCLIP15.04■□□□□ -02e-7■■□□□ 13.5
HDAC6-204ENST00000376643 SGCGQ13326 291 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 PROX2Q3B8N5 592 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 LINGO4Q6UY18 593 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 KYAT3Q6YP21 454 aaKnown RBP15.04■□□□□ -0
HDAC6-204ENST00000376643 DENND6BQ8NEG7 585 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 OR7D4Q8NG98 312 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 ENOX1Q8TC92 643 aaKnown RBP15.04■□□□□ -0
HDAC6-204ENST00000376643 CASKIN2Q8WXE0 1202 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 CPA5Q8WXQ8 436 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 ARRDC3Q96B67 414 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 C1QTNF7Q9BXJ2 289 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 OSBPL2Q9H1P3 480 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 MAGEH1Q9H213 219 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 METTL5Q9NRN9 209 aaKnown RBP15.04■□□□□ -0
HDAC6-204ENST00000376643 NLGN3Q9NZ94 848 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 OR12D3Q9UGF7 316 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms