RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 AGAP2Q99490 1192 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 TBL1YQ9BQ87 522 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 LRRC40Q9H9A6 602 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLCN6-206ENST00000376496 PLK2Q9NYY3 685 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 SLC17A7Q9P2U7 560 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 HSFX1Q9UBD0 423 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 MYLKQ15746 1914 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 LINC01553A4QN01 128 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 FAM47DPA6NHR8 397 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 ANKRD65E5RJM6 399 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 PER2O15055 1255 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 GRM6O15303 877 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 MT-ND3P03897 115 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 CKMP06732 381 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
CLCN6-206ENST00000376496 FSCBQ5H9T9 825 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 C9orf50Q5SZB4 431 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 STEAP4Q687X5 459 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 DENND5AQ6IQ26 1287 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 NKIRAS1Q9NYS0 192 aa12.81□□□□□ -0.36
CLCN6-206ENST00000376496 C2orf71A6NGG8 1288 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 PGGT1BP53609 377 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 WNT3AP56704 352 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 GNA12Q03113 381 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 ZNF33AQ06730 810 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 KLHDC10Q6PID8 442 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 RASSF3Q86WH2 238 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 TMC8Q8IU68 726 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 PLD4Q96BZ4 506 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 TCEAL4Q96EI5 215 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 PKNOX2Q96KN3 472 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 FSD1LQ9BXM9 530 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 SLC2A6Q9UGQ3 507 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 OBSL1O75147 1896 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 TCP11X1B4DZS4 312 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 TYROBPO43914 113 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 CACNG3O60359 315 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 ADH1AP07327 375 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 HOXD9P28356 352 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-206ENST00000376496 FOXN2P32314 431 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 HSP90AA5PQ58FG0 334 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 ADGRF1Q5T601 910 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 NAPEPLDQ6IQ20 393 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 PSRC1Q6PGN9 363 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-206ENST00000376496 RBM23Q86U06 439 aaKnown RBP12.8□□□□□ -0.36
CLCN6-206ENST00000376496 CARNMT1Q8N4J0 409 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 SPPL3Q8TCT6 385 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 WFDC5Q8TCV5 224 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 CEP295NLQ96MC4 621 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 LRRC3Q9BY71 257 aa12.8□□□□□ -0.36
CLCN6-206ENST00000376496 IQANK1A0A1B0GTG1 560 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ZCWPW2A0A1B0GU75 182 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CBX4O00257 560 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 TBL1XO60907 577 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 PRKCGP05129 697 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 POLBP06746 335 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 MMP2P08253 660 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ADRA1DP25100 572 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 RENBPP51606 427 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 NTHL1P78549 312 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CDH17Q12864 832 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CBLBQ13191 982 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CAMK1Q14012 370 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 HNRNPDQ14103 355 aaKnown RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 SEPT6Q14141 434 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 LBRQ14739 615 aaKnown RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ANO4Q32M45 955 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ANKRD20A4Q4UJ75 823 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CDHR3Q6ZTQ4 885 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ITIH5Q86UX2 942 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 TCP10LQ8TDR4 215 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CERS2Q96G23 380 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ZNF317Q96PQ6 595 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 SLC13A1Q9BZW2 595 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 FETUBQ9UGM5 382 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 AAR2Q9Y312 384 aaKnown RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CCL22O00626 93 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 SNAP91O60641 907 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ANXA9O76027 345 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 GLUD1P00367 558 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 EPCAMP16422 314 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 DRD4P21917 467 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 RGRP47804 291 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 NR1H3Q13133 447 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 PARP15Q460N3 678 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 TTC39BQ5VTQ0 682 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 RNF219Q5W0B1 726 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CPLX4Q7Z7G2 160 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 MRPL43Q8N983 215 aaKnown RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 DENND1AQ8TEH3 1009 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 THOC1Q96FV9 657 aaKnown RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CHMP6Q96FZ7 201 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 NSMCE3Q96MG7 304 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 SEMA3CQ99985 751 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CFAP97Q9P2B7 532 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms