RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 PARP14Q460N5 1801 aa11.69□□□□□ -0.54
TM9SF2-201ENST00000376387 LCTP09848 1927 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 COL4A5P29400 1685 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 INO80B-WBP1J3KQ70 363 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 HDAC3O15379 428 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 HCRTO43612 131 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 MFSD11O43934 449 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 MAFO75444 373 aaPredicted RBP11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 CKMT2P17540 419 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 PROZP22891 400 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 CCR3P51677 355 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 SFSWAPQ12872 951 aaKnown RBP11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 HMBOX1Q6NT76 420 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 CLEC14AQ86T13 490 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 TMEM126BQ8IUX1 230 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 ALDH16A1Q8IZ83 802 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 SPATA6LQ8N4H0 392 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 TMEM151AQ8N4L1 468 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 ZNF669Q96BR6 464 aaPredicted RBP11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 MAELQ96JY0 434 aaKnown RBP11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 ZNF597Q96LX8 424 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 TRPV6Q9H1D0 765 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 CDT1Q9H211 546 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 INIPQ9NRY2 104 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 OXSMQ9NWU1 459 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 VPS28Q9UK41 221 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 AP4E1Q9UPM8 1137 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 C9IYK1 514 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 E7ENX8 843 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 MDM4O15151 490 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 AVPR1AP37288 418 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 RPL14P50914 215 aaKnown RBP11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 NAGLUP54802 743 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 ZBTB46Q86UZ6 589 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 LSMEM2Q8N112 164 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 LZTR1Q8N653 840 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 URGCPQ8TCY9 931 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 P2RY11Q96G91 374 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 APBA2Q99767 749 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 NOL11Q9H8H0 719 aaKnown RBP11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 ZBTB26Q9HCK0 441 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 CHST12Q9NRB3 414 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 FAIMQ9NVQ4 179 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 GGA3Q9NZ52 723 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 PADI4Q9UM07 663 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 BARX2Q9UMQ3 279 aaPredicted RBP11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 CLEC11AQ9Y240 323 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 NME7Q9Y5B8 376 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 SNX13Q9Y5W8 968 aa11.68□□□□□ -0.54
TM9SF2-201ENST00000376387 GNAO1P09471 354 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 UBA1P22314 1058 aaKnown RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 HOXD10P28358 340 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 STAT5BP51692 787 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 HSD17B7P56937 341 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 NAA20P61599 178 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 PRAMEP78395 509 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 TXNL4AP83876 142 aaKnown RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 GRTP1Q5TC63 336 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 LCLAT1Q6UWP7 414 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 Q6ZNX1 250 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 EEPD1Q7L9B9 569 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 SMYD1Q8NB12 490 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 MFSD3Q96ES6 412 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 TBCBQ99426 244 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 RPF1Q9H9Y2 349 aaKnown RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 CDC14AQ9UNH5 594 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 AP4S1Q9Y587 144 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 IGKV6D-21A0A0A0MT36 114 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 TMEM114B3SHH9 223 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 DPYSL4O14531 572 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 PHGDHO43175 533 aaKnown RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 EGFRP00533 1210 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 ETFBP38117 255 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 HSPA13P48723 471 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 EFNA5P52803 228 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 SLC6A3Q01959 620 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 PTK2BQ14289 1009 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 SURF1Q15526 300 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 DPYSL2Q16555 572 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 CLVS1Q8IUQ0 354 aaPredicted RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 FIBCD1Q8N539 461 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 CPSF7Q8N684 471 aaKnown RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 ZBTB8BQ8NAP8 495 aaPredicted RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 HPDLQ96IR7 371 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 CDHR1Q96JP9 859 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 CPNE1Q99829 537 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 CXCL16Q9H2A7 254 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 PCDHGA7Q9Y5G6 932 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 WNT10BO00744 389 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 POLBP06746 335 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 MLNP12872 115 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 CCDC130P13994 396 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 GARSP41250 739 aaKnown RBP11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 LIMK2P53671 638 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 KIZQ2M2Z5 673 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 ACOT1Q86TX2 421 aa11.67□□□□□ -0.54
TM9SF2-201ENST00000376387 NDRG1Q92597 394 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms