RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 RIMS3Q9UJD0 308 aa15.31■□□□□ 0.04
CCHCR1-201ENST00000376266 EFR3BQ9Y2G0 817 aa15.31■□□□□ 0.04
CCHCR1-201ENST00000376266 DERAQ9Y315 318 aa15.31■□□□□ 0.04
CCHCR1-201ENST00000376266 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
CCHCR1-201ENST00000376266 VNN1O95497 513 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 ITGB3P05106 788 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 KRT19P08727 400 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 KCNA4P22459 653 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 PSMD7P51665 324 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 AP3M2P53677 418 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 CREB5Q02930 508 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 RELAQ04206 551 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 KCTD21Q4G0X4 260 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 PAN2Q504Q3 1202 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 C9orf50Q5SZB4 431 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 MBLAC2Q68D91 279 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 ZFP1Q6P2D0 407 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 DARS2Q6PI48 645 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 DHRS4L2Q6PKH6 230 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 NT5DC4Q86YG4 428 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 TICAM1Q8IUC6 712 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 HERVK_113Q902F9 699 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 FAM96AQ9H5X1 160 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 SMYD2Q9NRG4 433 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 DNAJC28Q9NX36 388 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 UBQLN1Q9UMX0 589 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 TMEM247A6NEH6 219 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 TBKBP1A7MCY6 615 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 TRDMT1O14717 391 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 DGKIO75912 1065 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 TFPTP0C1Z6 253 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 ZNF24P17028 368 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 HOXD12P35452 270 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 YWHAZP63104 245 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 ZNF280BQ86YH2 543 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 GSDMBQ8TAX9 411 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 RTKNQ9BST9 563 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 TBC1D13Q9NVG8 400 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 HCSTQ9UBK5 93 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 SIX4Q9UIU6 781 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 AIM2O14862 343 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 INPPL1O15357 1258 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 B4GALT3O60512 393 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 SERPINB7O75635 380 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 CSH1P0DML2 217 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 CSH2P0DML3 217 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 ALOX15P16050 662 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 KDELR1P24390 212 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 KCNJ11Q14654 390 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 FSCBQ5H9T9 825 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 BEST2Q8NFU1 509 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 CXorf38Q8TB03 319 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 SPATA18Q8TC71 538 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 URGCPQ8TCY9 931 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 ZNF606Q8WXB4 792 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 COX4I2Q96KJ9 171 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 PAAF1Q9BRP4 392 aa15.3■□□□□ 0.04
CCHCR1-201ENST00000376266 CASTOR2A6NHX0 329 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 PPEF2O14830 753 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 HOXA2O43364 376 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 FGF3P11487 239 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 PRKCHP24723 683 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 MSX2P35548 267 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 ITPRIPL1Q6GPH6 555 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 LILRA2Q8N149 483 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 PKP2Q99959 881 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 CAAP1Q9H8G2 361 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 RAB6BQ9NRW1 208 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 TBC1D23Q9NUY8 699 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 SLC38A7Q9NVC3 462 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 SELENONQ9NZV5 590 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 BCAP29Q9UHQ4 241 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 DOLKQ9UPQ8 538 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 PDCD11Q14690 1871 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 DDHD2O94830 711 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 APOEP02649 317 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 KRT7P08729 469 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 IGFBP6P24592 240 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 PSMA2P25787 234 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 PRDX6P30041 224 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 GABRB2P47870 512 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 ACADVLP49748 655 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 NUDT2P50583 147 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 ANKDD1AQ495B1 522 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 ZNF512Q96ME7 567 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 TSPAN18Q96SJ8 248 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 SLC2A11Q9BYW1 496 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 KLC2Q9H0B6 622 aa15.29■□□□□ 0.04
CCHCR1-201ENST00000376266 SERPINE1P05121 402 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 COL6A2P12110 1019 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 NELFEP18615 380 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 HALP42357 657 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 ALDH3B2P48448 385 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 RGS19P49795 217 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 MYL6P60660 151 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 ROR1Q01973 937 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 KLF10Q13118 480 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 TRPC3Q13507 836 aa15.28■□□□□ 0.04
CCHCR1-201ENST00000376266 SHHQ15465 462 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms