RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 LSM14AQ8ND56 463 aaKnown RBP23.72■■□□□ 1.39
C9orf47-202ENST00000375850 ARRDC3Q96B67 414 aa23.72■■□□□ 1.39
C9orf47-202ENST00000375850 BBC3Q96PG8 261 aaPredicted RBP23.72■■□□□ 1.39
C9orf47-202ENST00000375850 DUSP23Q9BVJ7 150 aa23.72■■□□□ 1.39
C9orf47-202ENST00000375850 HS3ST3A1Q9Y663 406 aa23.72■■□□□ 1.39
C9orf47-202ENST00000375850 A6NNZ2 444 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 TLX3O43711 291 aaPredicted RBP23.71■■□□□ 1.39
C9orf47-202ENST00000375850 PCDH8O95206 1070 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 LSM8O95777 96 aaKnown RBP23.71■■□□□ 1.39
C9orf47-202ENST00000375850 CKMT1AP12532 417 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 PRLRP16471 622 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 RRM1P23921 792 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 DUSP3P51452 185 aaPredicted RBP23.71■■□□□ 1.39
C9orf47-202ENST00000375850 NEK3P51956 506 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 RNASE9P60153 205 aaKnown RBP23.71■■□□□ 1.39
C9orf47-202ENST00000375850 FAM102AQ5T9C2 384 aaPredicted RBP23.71■■□□□ 1.39
C9orf47-202ENST00000375850 ERICH1Q86X53 443 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 PCDH20Q8N6Y1 951 aaKnown RBP23.71■■□□□ 1.39
C9orf47-202ENST00000375850 PRORYQ9H606 182 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 RETREG1Q9H6L5 497 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 NLGN3Q9NZ94 848 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 CA5BQ9Y2D0 317 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 LOC400499M0QZD8 3231 aa23.71■■□□□ 1.39
C9orf47-202ENST00000375850 A0A0D9SEW6 157 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 K7ERQ8 282 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 PIAS2O75928 621 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 MT-CO3P00414 261 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 GP1BAP07359 652 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 CYP11B1P15538 503 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 ETFBP38117 255 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 HNRNPKP61978 463 aaKnown RBP eCLIP23.7■■□□□ 1.38
C9orf47-202ENST00000375850 UBE2HP62256 183 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 RPS21P63220 83 aaKnown RBP23.7■■□□□ 1.38
C9orf47-202ENST00000375850 TMEM259Q4ZIN3 620 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 ARSIQ5FYB1 569 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 TFAP2DQ7Z6R9 452 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 OR13H1Q8NG92 308 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 TBCBQ99426 244 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 CALN1Q9BXU9 219 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 ZYG11BQ9C0D3 744 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 NDST4Q9H3R1 872 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 ANLNQ9NQW6 1124 aa23.7■■□□□ 1.38
C9orf47-202ENST00000375850 I6L893 689 aaPredicted RBP23.69■■□□□ 1.38
C9orf47-202ENST00000375850 SMAD6O43541 496 aaKnown RBP23.69■■□□□ 1.38
C9orf47-202ENST00000375850 AP1G1O43747 822 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 ITGB7P26010 798 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 SERPINH1P50454 418 aaKnown RBP23.69■■□□□ 1.38
C9orf47-202ENST00000375850 TBC1D25Q3MII6 688 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 DPY19L3Q6ZPD9 716 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 XYLT1Q86Y38 959 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 PLPP6Q8IY26 295 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 LSMEM2Q8N112 164 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 FAM181AQ8N9Y4 354 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 GRIN3AQ8TCU5 1115 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 FEM1CQ96JP0 617 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 HEPHQ9BQS7 1158 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 PLCB1Q9NQ66 1216 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 MPP6Q9NZW5 540 aa23.69■■□□□ 1.38
C9orf47-202ENST00000375850 PPARGC1AQ9UBK2 798 aaKnown RBP23.69■■□□□ 1.38
C9orf47-202ENST00000375850 AJAP1Q9UKB5 411 aaPredicted RBP23.69■■□□□ 1.38
C9orf47-202ENST00000375850 BRINP1O60477 761 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 LEFTY1O75610 366 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 TFE3P19532 575 aaPredicted RBP23.68■■□□□ 1.38
C9orf47-202ENST00000375850 ITPKBP27987 946 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 GEMIN4P57678 1058 aaKnown RBP23.68■■□□□ 1.38
C9orf47-202ENST00000375850 CAMK4Q16566 473 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 VWA3BQ502W6 1294 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 LINGO4Q6UY18 593 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 KYAT3Q6YP21 454 aaKnown RBP23.68■■□□□ 1.38
C9orf47-202ENST00000375850 GCNT7Q6ZNI0 430 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 BNIPLQ7Z465 357 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 CHST14Q8NCH0 376 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 KLK6Q92876 244 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 CRELD1Q96HD1 420 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 DEPDC7Q96QD5 511 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 MYOCQ99972 504 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 ATP13A1Q9HD20 1204 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 GPR27Q9NS67 375 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 NCKIPSDQ9NZQ3 722 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 ZFR2Q9UPR6 939 aaKnown RBP23.68■■□□□ 1.38
C9orf47-202ENST00000375850 WASF2Q9Y6W5 498 aa23.68■■□□□ 1.38
C9orf47-202ENST00000375850 H3BM21 787 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 SCAMP1O15126 338 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 ADRB3P13945 408 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 L1CAMP32004 1257 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 RAPGEF1Q13905 1077 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 DRAP1Q14919 205 aaPredicted RBP23.67■■□□□ 1.38
C9orf47-202ENST00000375850 CARD16Q5EG05 197 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 Q6ZSR6 202 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 OR7D4Q8NG98 312 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 RAB7BQ96AH8 199 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 ISG20Q96AZ6 181 aaKnown RBP23.67■■□□□ 1.38
C9orf47-202ENST00000375850 SPON2Q9BUD6 331 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 SLC17A9Q9BYT1 436 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 TNKS2Q9H2K2 1166 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 FZD3Q9NPG1 666 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 UCKL1Q9NWZ5 548 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 DACH1Q9UI36 760 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 CSNK1G3Q9Y6M4 447 aa23.67■■□□□ 1.38
C9orf47-202ENST00000375850 ARID1BQ8NFD5 2236 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms