RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 LTFP02788 710 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 JUNP05412 331 aaKnown RBP20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 TMBIM6P55061 237 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 CASC4Q6P4E1 433 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 CYP2U1Q7Z449 544 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 GATA5Q9BWX5 397 aaPredicted RBP20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 COPG1Q9Y678 874 aaKnown RBP20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 GRID2O43424 1007 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 TRUB2O95900 331 aaKnown RBP20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 CHEK2O96017 543 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 TBXAS1P24557 533 aaPredicted RBP20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 PTPN20Q4JDL3 420 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 GK5Q6ZS86 529 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 PQLC3Q8N755 202 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 BPIFB6Q8NFQ5 453 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 ZC3H15Q8WU90 426 aaKnown RBP20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 FEM1CQ96JP0 617 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 GLT1D1Q96MS3 346 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 EFHD1Q9BUP0 239 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 MTMR10Q9NXD2 777 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 KLQ9UEF7 1012 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 USP18Q9UMW8 372 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 ATP11BQ9Y2G3 1177 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 CLDN25C9JDP6 229 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 EPHX4Q8IUS5 362 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 CANT1Q8WVQ1 401 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 CAPSLQ8WWF8 208 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 TFAP2BQ92481 460 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 PEBP4Q96S96 227 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 PSME2Q9UL46 239 aa20.88■□□□□ 0.93
TMEFF1-201ENST00000374879 FAM149AA5PLN7 773 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 LYPLA2O95372 231 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 ASNSP08243 561 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 GARTP22102 1010 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 NKX2-5P52952 324 aaPredicted RBP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 BFSP2Q13515 415 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 ZNF846Q147U1 533 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 STILQ15468 1287 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 ITIH5Q86UX2 942 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 CAMK1DQ8IU85 385 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 MMAAQ8IVH4 418 aaKnown RBP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 RTP4Q96DX8 246 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 DUS3LQ96G46 650 aaKnown RBP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 PIH1D1Q9NWS0 290 aaKnown RBP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 CLOCKO15516 846 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 TRIM13O60858 407 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 TFE3P19532 575 aaPredicted RBP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 TGM1P22735 817 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 PTPN9P43378 593 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 RPL14P50914 215 aaKnown RBP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 RAD23AP54725 363 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 DGKDQ16760 1214 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 RAB6CQ53S08 254 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 PDPRQ8NCN5 879 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 TOP1MTQ969P6 601 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 PBXIP1Q96AQ6 731 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 GMLQ99445 158 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 RAB6CQ9H0N0 254 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 RAVER2Q9HCJ3 691 aaKnown RBP20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 DGKBQ9Y6T7 804 aa20.87■□□□□ 0.93
TMEFF1-201ENST00000374879 NOTOA8MTQ0 251 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 TNFRSF10AO00220 468 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 TRIM24O15164 1050 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 MSI1O43347 362 aaKnown RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 EXTL3O43909 919 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ALDH1A2O94788 518 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ALOX5P09917 674 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 TFEBP19484 476 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ADSLP30566 484 aaPredicted RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 E2F2Q14209 437 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ABRAXAS1Q6UWZ7 409 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 USP43Q70EL4 1123 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 PIWIL3Q7Z3Z3 882 aaKnown RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 PLD5Q8N7P1 536 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 SYTL5Q8TDW5 730 aaPredicted RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 SNX19Q92543 992 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 CNDP2Q96KP4 475 aaKnown RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 TAAR1Q96RJ0 339 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 TUBA1CQ9BQE3 449 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 FANCEQ9HB96 536 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 SNX15Q9NRS6 342 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 HES2Q9Y543 173 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 HEATR9A2RTY3 570 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 F7P08709 466 aaPredicted RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 MYCLP12524 364 aaPredicted RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 PSMD8P48556 350 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 CCT8P50990 548 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 PPP2R2DQ66LE6 453 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ERMP1Q7Z2K6 904 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ANKRD13BQ86YJ7 626 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 C4orf19Q8IY42 314 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ATP6V0D2Q8N8Y2 350 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 OR5B17Q8NGF7 314 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ATXN7L3BQ96GX2 97 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 UNC93B1Q9H1C4 597 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 RAD21L1Q9H4I0 556 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 GMPR2Q9P2T1 348 aaKnown RBP20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 DKK3Q9UBP4 350 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms