RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 HSPA9P38646 679 aaKnown RBP16.13■□□□□ 0.17
TMEM53-204ENST00000372243 TNFRSF4P43489 277 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 MMP13P45452 471 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 SLC44A4Q53GD3 710 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 NAIF1Q69YI7 327 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-204ENST00000372243 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 CNTD1Q8N815 330 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 GLIS1Q8NBF1 620 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 UCMAQ8WVF2 138 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 ISG20Q96AZ6 181 aaKnown RBP16.13■□□□□ 0.17
TMEM53-204ENST00000372243 CIPCQ9C0C6 399 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 RBM22Q9NW64 420 aaKnown RBP eCLIP16.13■□□□□ 0.17
TMEM53-204ENST00000372243 PAK5Q9P286 719 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 KLHL8Q9P2G9 620 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-204ENST00000372243 ERVW-1Q9UQF0 538 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 ATP8A1Q9Y2Q0 1164 aa16.13■□□□□ 0.17
TMEM53-204ENST00000372243 NEBLO76041 1014 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 SRCP12931 536 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 RPL22P35268 128 aaKnown RBP16.12■□□□□ 0.17
TMEM53-204ENST00000372243 NNMTP40261 264 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 CTSOP43234 321 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-204ENST00000372243 NUMBP49757 651 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 NRLP54845 237 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 ZNF235Q14590 738 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 CYTH1Q15438 398 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 TMEM196Q5HYL7 178 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 ALG1LQ6GMV1 187 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 ITPRIPL1Q6GPH6 555 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 LINGO4Q6UY18 593 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 LEKR1Q6ZMV7 388 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 PID1Q7Z2X4 250 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 RNF135Q8IUD6 432 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 SH2D3CQ8N5H7 860 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 ZNF419Q96HQ0 510 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-204ENST00000372243 MRGPRX3Q96LB0 322 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 CEP44Q9C0F1 390 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 RAB17Q9H0T7 212 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 FBRSL1Q9HCM7 1045 aaKnown RBP16.12■□□□□ 0.17
TMEM53-204ENST00000372243 WNT16Q9UBV4 365 aa16.12■□□□□ 0.17
TMEM53-204ENST00000372243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.11■□□□□ 0.17
TMEM53-204ENST00000372243 MAN2B1O00754 1011 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 NPC1O15118 1278 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 TMCC1O94876 653 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 MT-CO1P00395 513 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 ETS1P14921 441 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 DRD1P21728 446 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 PRKCQQ04759 706 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 NSUN2Q08J23 767 aaKnown RBP eCLIP16.11■□□□□ 0.17
TMEM53-204ENST00000372243 PTPRNQ16849 979 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 ARHGEF18Q6ZSZ5 1173 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 UBALD2Q8IYN6 164 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 ATP11CQ8NB49 1132 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 CCDC110Q8TBZ0 833 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 KCNV2Q8TDN2 545 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 USP33Q8TEY7 942 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 RPL10LQ96L21 214 aaKnown RBP16.11■□□□□ 0.17
TMEM53-204ENST00000372243 AGAP3Q96P47 875 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 ERP44Q9BS26 406 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 CINPQ9BW66 212 aaPredicted RBP16.11■□□□□ 0.17
TMEM53-204ENST00000372243 CEP41Q9BYV8 373 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 PLA2G4CQ9UP65 541 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 UTP11Q9Y3A2 253 aaKnown RBP16.11■□□□□ 0.17
TMEM53-204ENST00000372243 ACTL7AQ9Y615 435 aa16.11■□□□□ 0.17
TMEM53-204ENST00000372243 SHISA7A6NL88 538 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 MUC22E2RYF6 1773 aaPredicted RBP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 ZBTB24O43167 697 aaPredicted RBP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 ATP9BO43861 1147 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 HLA-DQB2P05538 268 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 ZSCAN5DPP0CG00 497 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 HNRNPLP14866 589 aaKnown RBP eCLIP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 CES1P23141 567 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 CD68P34810 354 aaPredicted RBP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 STK19P49842 368 aaPredicted RBP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 ST8SIA6P61647 398 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 MLF2Q15773 248 aaPredicted RBP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 PARP6Q2NL67 630 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 PLPP6Q8IY26 295 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 GJD3Q8N144 294 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 TSEN2Q8NCE0 465 aaKnown RBP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 MYO19Q96H55 970 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 PPP1R2P1Q96PQ5 205 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 MGME1Q9BQP7 344 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 TRIM51Q9BSJ1 452 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 POLR1EQ9GZS1 481 aaKnown RBP16.1■□□□□ 0.17
TMEM53-204ENST00000372243 GBA3Q9H227 469 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 NT5MQ9NPB1 228 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 SLC8A2Q9UPR5 921 aa16.1■□□□□ 0.17
TMEM53-204ENST00000372243 BHMG1C9JSJ3 638 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-204ENST00000372243 K7EQS6 105 aa16.09■□□□□ 0.17
TMEM53-204ENST00000372243 SMAD6O43541 496 aaKnown RBP16.09■□□□□ 0.17
TMEM53-204ENST00000372243 HEXIM1O94992 359 aaKnown RBP16.09■□□□□ 0.17
TMEM53-204ENST00000372243 CR2P20023 1033 aa16.09■□□□□ 0.17
TMEM53-204ENST00000372243 FDFT1P37268 417 aa16.09■□□□□ 0.17
TMEM53-204ENST00000372243 CSNK1DP48730 415 aa16.09■□□□□ 0.17
TMEM53-204ENST00000372243 DRG2P55039 364 aaKnown RBP16.09■□□□□ 0.17
TMEM53-204ENST00000372243 GRSF1Q12849 480 aaKnown RBP eCLIP16.09■□□□□ 0.17
TMEM53-204ENST00000372243 PON2Q15165 354 aa16.09■□□□□ 0.17
TMEM53-204ENST00000372243 TRIP13Q15645 432 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-204ENST00000372243 RALGPS1Q5JS13 557 aa16.09■□□□□ 0.17
TMEM53-204ENST00000372243 TEX35Q5T0J7 233 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms