RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 C1QTNF9P0C862 333 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 SPINK2P20155 84 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 TNFAIP3P21580 790 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 L1CAMP32004 1257 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 RFC1P35251 1148 aaPredicted RBP19.28■□□□□ 0.68
TMEM53-201ENST00000372235 NXPH1P58417 271 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 ANO6Q4KMQ2 910 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 CARD16Q5EG05 197 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 MANEALQ5VSG8 457 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 ACAD10Q6JQN1 1059 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 DCUN1D2Q6PH85 259 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 WDR59Q6PJI9 974 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 ERN2Q76MJ5 926 aaKnown RBP19.28■□□□□ 0.68
TMEM53-201ENST00000372235 MON1BQ7L1V2 547 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 OR7D4Q8NG98 312 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 JOSD2Q8TAC2 188 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 CASKIN2Q8WXE0 1202 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 PCDHB18PQ96TA0 734 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 HEPHQ9BQS7 1158 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 CATSPERBQ9H7T0 1116 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 EBF2Q9HAK2 575 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 TMPRSS4Q9NRS4 437 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 ARHGAP20Q9P2F6 1191 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 FTSJ1Q9UET6 329 aa19.28■□□□□ 0.68
TMEM53-201ENST00000372235 EIF3CLB5ME19 914 aaKnown RBP19.27■□□□□ 0.68
TMEM53-201ENST00000372235 K7ERQ8 282 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 ZMPSTE24O75844 475 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 LRIG2O94898 1065 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 RXRGP48443 463 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 NEK3P51956 506 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 HDAC4P56524 1084 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 PPP2CBP62714 309 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 PPP2CAP67775 309 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 TPM4P67936 248 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 PIP5KL1Q5T9C9 394 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 LINGO4Q6UY18 593 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 APTXQ7Z2E3 356 aaKnown RBP19.27■□□□□ 0.68
TMEM53-201ENST00000372235 NLRP14Q86W24 1093 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 RAB7BQ96AH8 199 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 EIF3CQ99613 913 aaKnown RBP19.27■□□□□ 0.68
TMEM53-201ENST00000372235 EPAS1Q99814 870 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 CNPY3Q9BT09 278 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 TMEM121BQ9BXQ6 578 aaPredicted RBP19.27■□□□□ 0.68
TMEM53-201ENST00000372235 KLK13Q9UKR3 277 aa19.27■□□□□ 0.68
TMEM53-201ENST00000372235 ACACBO00763 2458 aa19.27■□□□□ 0.67
TMEM53-201ENST00000372235 TPRP12270 2363 aaKnown RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 A0A1W2PQC6 194 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 SMAD6O43541 496 aaKnown RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 LEFTY1O75610 366 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 TOP3BO95985 862 aaKnown RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 WNT1P04628 370 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 CTSLP07711 333 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 C1SP09871 688 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 ITGB7P26010 798 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 AKT2P31751 481 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 DNA2P51530 1060 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 YBEYP58557 167 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 SNRPD1P62314 119 aaKnown RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 RAD51Q06609 339 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 ARSIQ5FYB1 569 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 KIAA1161Q6NSJ0 714 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 FBXL19Q6PCT2 694 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 LAYNQ6UX15 382 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 DPY19L3Q6ZPD9 716 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 PHLDB2Q86SQ0 1253 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 HORMAD1Q86X24 394 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 DCP2Q8IU60 420 aaKnown RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 ARHGEF2Q92974 986 aaKnown RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 ARHGEF26Q96DR7 871 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 KLHDC7BQ96G42 594 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 FEM1CQ96JP0 617 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 NCAPGQ9BPX3 1015 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 OSBPL1AQ9BXW6 950 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 EDEM3Q9BZQ6 932 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 HSD3B7Q9H2F3 369 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 RTN4Q9NQC3 1192 aaKnown RBP19.26■□□□□ 0.67
TMEM53-201ENST00000372235 PARVAQ9NVD7 372 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 PCDHGA1Q9Y5H4 931 aa19.26■□□□□ 0.67
TMEM53-201ENST00000372235 DOCK4Q8N1I0 1966 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 FAM170AA1A519 330 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 KCNK3O14649 394 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 FGF10O15520 208 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-201ENST00000372235 DKK1O94907 266 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 GSRP00390 522 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 HNRNPA2B1P22626 353 aaKnown RBP19.25■□□□□ 0.67
TMEM53-201ENST00000372235 EPHB2P29323 1055 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 MAT2AP31153 395 aaKnown RBP19.25■□□□□ 0.67
TMEM53-201ENST00000372235 ZNF165P49910 485 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 METAP1P53582 386 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 RPS21P63220 83 aaKnown RBP19.25■□□□□ 0.67
TMEM53-201ENST00000372235 ARF5P84085 180 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 POM121L1PQ3SYA9 428 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 HS1BP3Q53T59 392 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 KCNT1Q5JUK3 1230 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 SCYL2Q6P3W7 929 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 MCOLN2Q8IZK6 566 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 GRIN3AQ8TCU5 1115 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 SAP25Q8TEE9 199 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 MCEEQ96PE7 176 aa19.25■□□□□ 0.67
TMEM53-201ENST00000372235 TNKS2Q9H2K2 1166 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms