RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 FGF13Q92913 245 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 USP13Q92995 863 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 ELAC2Q9BQ52 826 aaKnown RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 NSRP1Q9H0G5 558 aaKnown RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 OSBPL2Q9H1P3 480 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 SSU72Q9NP77 194 aaKnown RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 ZC3H7BQ9UGR2 993 aaKnown RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 PPP1R12AO14974 1030 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 LRIG2O94898 1065 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 PFKLP17858 780 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 KRT4P19013 534 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 RPA3P35244 121 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 WASHC5Q12768 1159 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 ATAT1Q5SQI0 421 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 ARID3BQ8IVW6 561 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 MPP5Q8N3R9 675 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 DEFB123Q8N688 67 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 GUCD1Q96NT3 240 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 TDP1Q9NUW8 608 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 FGFR1OP2Q9NVK5 253 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 CFAP97Q9P2B7 532 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 AGO1Q9UL18 857 aaKnown RBP17.66■□□□□ 0.42
UBE3D-203ENST00000369747 VANGL2Q9ULK5 521 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 ARHGAP26Q9UNA1 814 aa17.66■□□□□ 0.42
UBE3D-203ENST00000369747 HELZP42694 1942 aaKnown RBP17.65■□□□□ 0.42
UBE3D-203ENST00000369747 H3BQ06 376 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-203ENST00000369747 OPHN1O60890 802 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 FOXN2P32314 431 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 FAM133BQ5BKY9 247 aaKnown RBP17.65■□□□□ 0.42
UBE3D-203ENST00000369747 RAP1GAP2Q684P5 730 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 OTUD6BQ8N6M0 293 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 CCNYQ8ND76 341 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 ZSCAN18Q8TBC5 510 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-203ENST00000369747 SH3RF2Q8TEC5 729 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 MYEOVQ96EZ4 313 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 C1orf74Q96LT6 269 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 CEP41Q9BYV8 373 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 XAB2Q9HCS7 855 aaKnown RBP17.65■□□□□ 0.42
UBE3D-203ENST00000369747 TMEM51Q9NW97 253 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 SAMD15Q9P1V8 674 aa17.65■□□□□ 0.42
UBE3D-203ENST00000369747 F5H423 210 aaPredicted RBP17.64■□□□□ 0.42
UBE3D-203ENST00000369747 LEFTY2O00292 366 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 STK10O94804 968 aaKnown RBP17.64■□□□□ 0.42
UBE3D-203ENST00000369747 TAC1P20366 129 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 CA4P22748 312 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 SLC6A4P31645 630 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 IL9RQ01113 521 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 ITIH4Q14624 930 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 SLC1A5Q15758 541 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 RFWD3Q6PCD5 774 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 UNC5AQ6ZN44 842 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 C10orf67Q8IYJ2 551 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 ZNF567Q8N184 647 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 NPWQ8N729 165 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 SEPT10Q9P0V9 454 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 GRID1Q9ULK0 1009 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 NEU3Q9UQ49 428 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 RAD54BQ9Y620 910 aa17.64■□□□□ 0.42
UBE3D-203ENST00000369747 SOBPA7XYQ1 873 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 E9PAM4 449 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 ACSL4O60488 711 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 SNX3O60493 162 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 CPP00450 1065 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 GSTA2P09210 222 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 PRKCHP24723 683 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 SF3A3Q12874 501 aaKnown RBP eCLIP17.64■□□□□ 0.41
UBE3D-203ENST00000369747 RNF187Q5TA31 235 aaPredicted RBP17.64■□□□□ 0.41
UBE3D-203ENST00000369747 MANEALQ5VSG8 457 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 GPR153Q6NV75 609 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 FBXL22Q6P050 247 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 SMRP1Q8NCR6 262 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 PPM1EQ8WY54 764 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 EPAS1Q99814 870 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 EBNA1BP2Q99848 306 aaKnown RBP17.64■□□□□ 0.41
UBE3D-203ENST00000369747 FERMT1Q9BQL6 677 aa17.64■□□□□ 0.41
UBE3D-203ENST00000369747 TRIM56Q9BRZ2 755 aaKnown RBP17.64■□□□□ 0.41
UBE3D-203ENST00000369747 EIF2B3Q9NR50 452 aaKnown RBP17.64■□□□□ 0.41
UBE3D-203ENST00000369747 DOCK8Q8NF50 2099 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 CXorf49A8MYA2 514 aaPredicted RBP17.63■□□□□ 0.41
UBE3D-203ENST00000369747 TRDMT1O14717 391 aaKnown RBP17.63■□□□□ 0.41
UBE3D-203ENST00000369747 INHBAP08476 426 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 PSMB4P28070 264 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 EPHB2P29323 1055 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 SLC11A2P49281 568 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 CDK16Q00536 496 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 SPARCL1Q14515 664 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 FAM78AQ5JUQ0 283 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 RWDD4Q6NW29 188 aaKnown RBP17.63■□□□□ 0.41
UBE3D-203ENST00000369747 Q6ZNB5 142 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 CHSY1Q86X52 802 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 ZNF683Q8IZ20 524 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 PDCD7Q8N8D1 485 aaKnown RBP17.63■□□□□ 0.41
UBE3D-203ENST00000369747 PAIP2Q9BPZ3 127 aaKnown RBP17.63■□□□□ 0.41
UBE3D-203ENST00000369747 POMKQ9H5K3 350 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 MPP6Q9NZW5 540 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 IKBKGQ9Y6K9 419 aa17.63■□□□□ 0.41
UBE3D-203ENST00000369747 IQANK1A0A1B0GTG1 560 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 MLNP12872 115 aa17.62■□□□□ 0.41
UBE3D-203ENST00000369747 FOSL2P15408 326 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms