RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 CHN1P15882 459 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TYMPP19971 482 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 CHRM3P20309 590 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TKTP29401 623 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 GATMP50440 423 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TSPAN5P62079 268 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 CYP4F2P78329 520 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 CYP4F3Q08477 520 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 CHAF1BQ13112 559 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 MORF4L2Q15014 288 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 ZMYND11Q15326 602 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SMAD2Q15796 467 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TIGD6Q17RP2 521 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 ZNF852Q6ZMS4 543 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TAF8Q7Z7C8 310 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 RETREG3Q86VR2 466 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TSPYL5Q86VY4 417 aaPredicted RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SULF2Q8IWU5 870 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 RFKQ969G6 155 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 RPRD1AQ96P16 312 aaPredicted RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 FAM111AQ96PZ2 611 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 LMF1Q96S06 567 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SHCBP1LQ9BZQ2 653 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 C17orf75Q9HAS0 396 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SLC38A10Q9HBR0 1119 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 KCNH7Q9NS40 1196 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 FBXO28Q9NVF7 368 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 IPO11Q9UI26 975 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 KLHL20Q9Y2M5 609 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 PMF1-BGLAPU3KQ54 211 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 DDX3XO00571 662 aaKnown RBP eCLIP10.17□□□□□ -0.781e-6■■■□□ 16.8
SCNM1-202ENST00000368905 AXIN1O15169 862 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 CLIC2O15247 247 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 ATXN7O15265 892 aaPredicted RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TGFB1I1O43294 461 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 CYTIPO60759 359 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 APEHP13798 732 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SLC9A1P19634 815 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 NFKBIAP25963 317 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 NMT1P30419 496 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SFNP31947 248 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 QARSP47897 775 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 JAK3P52333 1124 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 RPS26P62854 115 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 ELP6Q0PNE2 266 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 E2F2Q14209 437 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 PFKFB4Q16877 469 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 PPP1R26Q5T8A7 1209 aaPredicted RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 LIN9Q5TKA1 542 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 DEGS2Q6QHC5 323 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 IRF2BP2Q7Z5L9 587 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TUSC5Q8IXB3 177 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SYCE1Q8N0S2 351 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SLC43A2Q8N370 569 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SPATA4Q8NEY3 305 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 RDM1Q8NG50 284 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 FAM71BQ8TC56 605 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 TMEM174Q8WUU8 243 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 PDLIM5Q96HC4 596 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 FEM1CQ96JP0 617 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 KCNC2Q96PR1 638 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 MRPL40Q9NQ50 206 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 EIF2B3Q9NR50 452 aaKnown RBP10.17□□□□□ -0.78
SCNM1-202ENST00000368905 SNX15Q9NRS6 342 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 DMAC2Q9NW81 257 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 CHMP2BQ9UQN3 213 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 UBIAD1Q9Y5Z9 338 aa10.17□□□□□ -0.78
SCNM1-202ENST00000368905 FER1L6Q2WGJ9 1857 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 A0A087X0T9 212 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 A0A0A6YYK5 440 aaPredicted RBP10.16□□□□□ -0.78
SCNM1-202ENST00000368905 A4D1N5 150 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 GOLGA8CPA6NN73 597 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 UPK3BL1B0FP48 263 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 UPK3BL2E5RIL1 263 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 CXCL11O14625 94 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 TBC1D4O60343 1298 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 TFRCP02786 760 aaKnown RBP10.16□□□□□ -0.78
SCNM1-202ENST00000368905 GJB1P08034 283 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 FAM228BP0C875 321 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 SYN1P17600 705 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 ITGB5P18084 799 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 KRT4P19013 534 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 JAM2P57087 298 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 KRT76Q01546 638 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 PTK2Q05397 1052 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 CYP2A13Q16696 494 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 RNF220Q5VTB9 566 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 SLC51BQ86UW2 128 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 KSR1Q8IVT5 923 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 CCDC105Q8IYK2 499 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 CLEC4DQ8WXI8 215 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 VWCEQ96DN2 955 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 ABHD8Q96I13 439 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 ZCCHC2Q9C0B9 1178 aaKnown RBP10.16□□□□□ -0.78
SCNM1-202ENST00000368905 CYTH4Q9UIA0 394 aa10.16□□□□□ -0.78
SCNM1-202ENST00000368905 CNOT11Q9UKZ1 510 aaKnown RBP10.16□□□□□ -0.78
SCNM1-202ENST00000368905 RNF112Q9ULX5 631 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms