RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CD48P09326 243 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SRGAP2CP0DJJ0 459 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 P4HA1P13674 534 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SCNN1AP37088 669 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 FDFT1P37268 417 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 HARS2P49590 506 aaKnown RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 CLCN5P51795 746 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SNX16P57768 344 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 FRG1Q14331 258 aaKnown RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 MXD4Q14582 209 aaPredicted RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 KYAT1Q16773 422 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SMTNL2Q2TAL5 461 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 FSCBQ5H9T9 825 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SH2D4BQ5SQS7 431 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 TEDDM1Q5T9Z0 273 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 UNC5AQ6ZN44 842 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 COLGALT2Q8IYK4 626 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 MARVELD2Q8N4S9 558 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 URGCPQ8TCY9 931 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 PPP4R1Q8TF05 950 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 IRGQQ8WZA9 623 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 CDKL2Q92772 493 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 ISL2Q96A47 359 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 FAM84AQ96KN4 292 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 RILPQ96NA2 401 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 FAM210AQ96ND0 272 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 TUBGCP5Q96RT8 1024 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 CPXM1Q96SM3 734 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 ADPGKQ9BRR6 497 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 CALN1Q9BXU9 219 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 EMILIN2Q9BXX0 1053 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 RHOBTB2Q9BYZ6 727 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 Q9H521 79 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SUDS3Q9H7L9 328 aaPredicted RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 PLAC1Q9HBJ0 212 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SMYD2Q9NRG4 433 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 MARCH5Q9NX47 278 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 PTTG2Q9NZH5 202 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 ATXN10Q9UBB4 475 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SAE1Q9UBE0 346 aaPredicted RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 MID2Q9UJV3 735 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 ADAM28Q9UKQ2 775 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 PPM1HQ9ULR3 514 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 MAD1L1Q9Y6D9 718 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 SF3B1O75533 1304 aaKnown RBP eCLIP11.75□□□□□ -0.536e-7■■■■■ 71.8
USF1-201ENST00000368019 GVINP1Q7Z2Y8 2422 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 HACD1B0YJ81 288 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 TMEM114B3SHH9 223 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 KCNN4O15554 427 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 PLIN3O60664 434 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 CILPO75339 1184 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 AP1G2O75843 785 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 MICAL2O94851 1124 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 POMCP01189 267 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 SOD2P04179 222 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 CAPNS1P04632 268 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 EDN1P05305 212 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 UBTFL6P0CB48 400 aaPredicted RBP11.74□□□□□ -0.53
USF1-201ENST00000368019 CSH1P0DML2 217 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 CSH2P0DML3 217 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 FGF3P11487 239 aaPredicted RBP11.74□□□□□ -0.53
USF1-201ENST00000368019 CD19P15391 556 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 NBL1P41271 181 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 GPD2P43304 727 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 CPA2P48052 419 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 NUMBP49757 651 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 PRKAA2P54646 552 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 CREB5Q02930 508 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 POU5F1BQ06416 359 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 DSC1Q08554 894 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 NIPAL4Q0D2K0 466 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 LAMB3Q13751 1172 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 MAP7Q14244 749 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 PCBP1Q15365 356 aaKnown RBP eCLIP11.74□□□□□ -0.53
USF1-201ENST00000368019 ADRM1Q16186 407 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 FASTKD1Q53R41 847 aaKnown RBP11.74□□□□□ -0.53
USF1-201ENST00000368019 OGFRL1Q5TC84 451 aaPredicted RBP11.74□□□□□ -0.53
USF1-201ENST00000368019 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 ZFP1Q6P2D0 407 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 BORAQ6PGQ7 559 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 MPZL3Q6UWV2 235 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 ZNF534Q76KX8 674 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 OTOP3Q7RTS5 596 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 TAS1R1Q7RTX1 841 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 SETD3Q86TU7 594 aaPredicted RBP11.74□□□□□ -0.53
USF1-201ENST00000368019 RASSF3Q86WH2 238 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 NDUFAF2Q8N183 169 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 PLD5Q8N7P1 536 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 RNF149Q8NC42 400 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 NAT14Q8WUY8 206 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 HSPH1Q92598 858 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 PEBP4Q96S96 227 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 TTC1Q99614 292 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 RTKNQ9BST9 563 aa11.74□□□□□ -0.53
USF1-201ENST00000368019 HERC2P3Q9BVR0 1158 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms