RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 R3HDM2Q9Y2K5 976 aaKnown RBP11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 PCDHB5Q9Y5E4 795 aa11.56□□□□□ -0.56
CSNK1E-202ENST00000366216 TCRBV21S2A2A0A5A6 115 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 TRABD2BA6NFA1 517 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 YJEFN3A6XGL0 299 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 E7ENQ6 273 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 J3QKU1 62 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 TRIM66O15016 1216 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 LIASO43766 372 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 ADAM23O75077 832 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 CBFA2T3O75081 653 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 NFATC1O95644 943 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 LTFP02788 710 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 FYNP06241 537 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 TFE3P19532 575 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 GRIK1P39086 918 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 SLC6A11P48066 632 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 SULT1E1P49888 294 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 AIF1P55008 147 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 CDH6P55285 790 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 ADCY2Q08462 1091 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 TFDP2Q14188 446 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 DPYSL3Q14195 570 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 LLGL1Q15334 1064 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 DPYSL2Q16555 572 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 PLEKHG6Q3KR16 790 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 HSF5Q4G112 596 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 RAB6CQ53S08 254 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 DCAF6Q58WW2 860 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 EOGTQ5NDL2 527 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 KAZNQ674X7 775 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 SCYL2Q6P3W7 929 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 SLC36A4Q6YBV0 504 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 C12orf40Q86WS4 652 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 LSM14AQ8ND56 463 aaKnown RBP11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 PIP4K2CQ8TBX8 421 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 IFT81Q8WYA0 676 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 FAF2Q96CS3 445 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 DCBLD2Q96PD2 775 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 ZNF670Q9BS34 389 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 SNRNP25Q9BV90 132 aaKnown RBP11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 RAB6CQ9H0N0 254 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 PRDM16Q9HAZ2 1276 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 TMEM51Q9NW97 253 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 ABI2Q9NYB9 513 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 PCOLCE2Q9UKZ9 415 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 MAGED2Q9UNF1 606 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 COL12A1Q99715 3063 aa11.55□□□□□ -0.56
CSNK1E-202ENST00000366216 TRAV19A0A0A6YYK7 116 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 ESYT3A0FGR9 886 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 C2orf78A6NCI8 922 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CAPN9O14815 690 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 DAPK3O43293 454 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CST8O60676 142 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 GAS8O95995 478 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 F9P00740 461 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CKMP06732 381 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CD48P09326 243 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CSH1P0DML2 217 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CSH2P0DML3 217 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CYP2F1P24903 491 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 ECHS1P30084 290 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 KCNJ1P48048 391 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 SLC5A3P53794 718 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 PTK6Q13882 451 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 KRT81Q14533 505 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 CASP8Q14790 479 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 DDR2Q16832 855 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 OTUD1Q5VV17 481 aaPredicted RBP11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 SYPL2Q5VXT5 272 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 RFX6Q8HWS3 928 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 SLC35B2Q8TB61 432 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 ATG4AQ8WYN0 398 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 RNF157Q96PX1 679 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 TRIM51Q9BSJ1 452 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 MAK16Q9BXY0 300 aaKnown RBP11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 PCDH18Q9HCL0 1135 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 TRPC7Q9HCX4 862 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 COMMD8Q9NX08 183 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 FAM53CQ9NYF3 392 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 IL37Q9NZH6 218 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 RCOR3Q9P2K3 495 aaPredicted RBP11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 NFU1Q9UMS0 254 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 NAALADL1Q9UQQ1 740 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 NEU2Q9Y3R4 380 aa11.54□□□□□ -0.56
CSNK1E-202ENST00000366216 COL5A1P20908 1838 aaPredicted RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 UNC79Q9P2D8 2635 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 APOC4-APOC2K7ER74 178 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 M0QYT0 321 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SCAMP3O14828 347 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 APOC2P02655 101 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 ITGAVP06756 1048 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 IL4RP24394 825 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 L1CAMP32004 1257 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 DEUP1Q05D60 604 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SNX1Q13596 522 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms