RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ARRDC3Q96B67 414 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 AGPAT1Q99943 283 aa13.98□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CALB1P05937 261 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RHOQP17081 205 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NUDT1P36639 197 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SERPINH1P50454 418 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CCT8P50990 548 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NXPH1P58417 271 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SCAPQ12770 1279 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CDO1Q16878 200 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ARL13BQ3SXY8 428 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NAPEPLDQ6IQ20 393 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 C22orf39Q6P5X5 142 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 DPY19L3Q6ZPD9 716 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ADAT2Q7Z6V5 191 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CCDC185Q8N715 623 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PNPLA1Q8N8W4 532 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 MFSD2AQ8NA29 543 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CHST14Q8NCH0 376 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RHBDD1Q8TEB9 315 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FAM172AQ8WUF8 416 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NTAN1Q96AB6 310 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SERAC1Q96JX3 654 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ELF4Q99607 663 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CDC6Q99741 560 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 HDAC8Q9BY41 377 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CEP44Q9C0F1 390 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PREBQ9HCU5 417 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TMEM248Q9NWD8 314 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 DMTF1Q9Y222 760 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 DOCK9Q9BZ29 2069 aa13.97□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PLXNB3Q9ULL4 1909 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 COL5A1P20908 1838 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TMEM8BA6NDV4 472 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 TLR4O00206 839 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 CBX4O00257 560 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 LRIG2O94898 1065 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PLEKP08567 350 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 GRK6P43250 576 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RXRGP48443 463 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 MAPKAPK2P49137 400 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 C21orf59P57076 290 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 POM121L1PQ3SYA9 428 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PRAMEF14Q5SWL7 426 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 RETSATQ6NUM9 610 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 NEK5Q6P3R8 708 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PRPF39Q86UA1 669 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 IQCHQ86VS3 1027 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SPATS2Q86XZ4 545 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PLPP6Q8IY26 295 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SAP25Q8TEE9 199 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ARHGEF2Q92974 986 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 SKA1Q96BD8 255 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 PCMTD1Q96MG8 357 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FUCA2Q9BTY2 467 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ERVMER34-1Q9H9K5 563 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ATP13A1Q9HD20 1204 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 AASDHPPTQ9NRN7 309 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 MYO6Q9UM54 1294 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 APOBEC2Q9Y235 224 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 FARP1Q9Y4F1 1045 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 ACTL7AQ9Y615 435 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 WASF2Q9Y6W5 498 aa13.96□□□□□ -0.17
TNFRSF1A-202ENST00000366159 BNIP3LO60238 219 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 LEFTY1O75610 366 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PRNPP04156 253 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 FERP16591 822 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GPD1P21695 349 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ACVRL1P37023 503 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ZNF143P52747 638 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 RPL7AP62424 266 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ARSIQ5FYB1 569 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ACAD10Q6JQN1 1059 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 KANSL1Q7Z3B3 1105 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 MCOLN2Q8IZK6 566 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TMEM145Q8NBT3 493 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ISG20Q96AZ6 181 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CCDC114Q96M63 670 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SPON2Q9BUD6 331 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SELENOOQ9BVL4 669 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 MAGEH1Q9H213 219 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TNKS2Q9H2K2 1166 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 NOL6Q9H6R4 1146 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 IL36AQ9UHA7 158 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PTPRBP23467 1997 aa13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 DSPP15924 2871 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CCP110O43303 1012 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TNFSF14O43557 240 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 L1CAMP32004 1257 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 IL9RQ01113 521 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 OVGP1Q12889 678 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ZNF284Q2VY69 593 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TMEM259Q4ZIN3 620 aa13.94□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CARD16Q5EG05 197 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms