RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.35
VAMP1-201ENST00000361716 WDTC1Q8N5D0 677 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 SAMD3Q8N6K7 520 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 MAGEE2Q8TD90 523 aaPredicted RBP12.9□□□□□ -0.35
VAMP1-201ENST00000361716 TWNKQ96RR1 684 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 FANCEQ9HB96 536 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 ITGB1BP2Q9UKP3 347 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 H0YCG3 227 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 EDN1P05305 212 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 CYP2C9P11712 490 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 PRDX6P30041 224 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 GSSP48637 474 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 KCNJ11Q14654 390 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 CA9Q16790 459 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 PIGGQ5H8A4 983 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 IGFN1Q86VF2 1251 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 FAM131BQ86XD5 332 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 CANT1Q8WVQ1 401 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 OMDQ99983 421 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 CYTH4Q9UIA0 394 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 SLC39A10Q9ULF5 831 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 CEP350Q5VT06 3117 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 LAMB1P07942 1786 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 MED7O43513 233 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 TPH1P17752 444 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 NR4A2P43354 598 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 ALDH3B2P48448 385 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 HSD17B4P51659 736 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 STAT5BP51692 787 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 TIGD2Q4W5G0 525 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 LYSMD3Q7Z3D4 306 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 MCUQ8NE86 351 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 OR6B3Q8NGW1 331 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 PBXIP1Q96AQ6 731 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 LGMNQ99538 433 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 EBNA1BP2Q99848 306 aaKnown RBP12.89□□□□□ -0.35
VAMP1-201ENST00000361716 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
VAMP1-201ENST00000361716 PRDM16Q9HAZ2 1276 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 NRBP2Q9NSY0 501 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
VAMP1-201ENST00000361716 IL1BP01584 269 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 JUNP05412 331 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 GPD1P21695 349 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 L1CAMP32004 1257 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 FAM219BQ5XKK7 198 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 EEF1DP3Q658K8 133 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 PID1Q7Z2X4 250 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 TMEM102Q8N9M5 508 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 PSD4Q8NDX1 1056 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 CPB2Q96IY4 423 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 MIR1-1HGQ9H1L0 117 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 SMOXQ9NWM0 555 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 PFDN6O15212 129 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 AQP9O43315 295 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 MICAL2O94851 1124 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 ASS1P00966 412 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 CAPSQ13938 189 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 LRRC38Q5VT99 294 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 SPNS2Q8IVW8 549 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 ARFGAP1Q8N6T3 406 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 NDRG1Q92597 394 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 AKT3Q9Y243 479 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 SNX9Q9Y5X1 595 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 KPNA7A9QM74 516 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 TK2O00142 265 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 CHADO15335 359 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 PHGDHO43175 533 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 BCAS2O75934 225 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 GARSP41250 739 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 CCDC142Q17RM4 750 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 SMUG1Q53HV7 270 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 STYK1Q6J9G0 422 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 ANKRD26P1Q6NSI1 321 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 TAS2R42Q7RTR8 314 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 DSG4Q86SJ6 1040 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 VSIG10LQ86VR7 867 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 NIM1KQ8IY84 436 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 DLG3Q92796 817 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 GATA5Q9BWX5 397 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 CYP4F12Q9HCS2 524 aa12.88□□□□□ -0.35
VAMP1-201ENST00000361716 DDX28Q9NUL7 540 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 CNOT6Q9ULM6 557 aaKnown RBP12.88□□□□□ -0.35
VAMP1-201ENST00000361716 A0A096LPK6 155 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 HEATR9A2RTY3 570 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 TRIM38O00635 465 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 CHEK2O96017 543 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ATP5BP06576 529 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms