RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ANLNQ9NQW6 1124 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 NLGN3Q9NZ94 848 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 COL27A1Q8IZC6 1860 aaPredicted RBP21.6■■□□□ 1.05
CD47-202ENST00000361309 COL6A6A6NMZ7 2263 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 ALPPL2P10696 532 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 TFE3P19532 575 aaPredicted RBP21.59■■□□□ 1.05
CD47-202ENST00000361309 PCBP4P57723 403 aaKnown RBP21.59■■□□□ 1.05
CD47-202ENST00000361309 PTPN20Q4JDL3 420 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 ZNF542PQ5EBM4 170 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 Q6ZSR6 202 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 ABI3BPQ7Z7G0 1075 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 CREBRFQ8IUR6 639 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 ZNF683Q8IZ20 524 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 GRIN3AQ8TCU5 1115 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 SHC3Q92529 594 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 ZNF578Q96N58 590 aaPredicted RBP21.59■■□□□ 1.05
CD47-202ENST00000361309 DEPDC7Q96QD5 511 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 HDAC8Q9BY41 377 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 TNKS2Q9H2K2 1166 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 DNAJC28Q9NX36 388 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 ARHGEF38Q9NXL2 777 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 APEX2Q9UBZ4 518 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 IL36AQ9UHA7 158 aa21.59■■□□□ 1.05
CD47-202ENST00000361309 A0A0D9SEW6 157 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 LY6G6EA0A0G2JKS1 128 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 I6L893 689 aaPredicted RBP21.58■■□□□ 1.05
CD47-202ENST00000361309 USP12O75317 370 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 ENDOD1O94919 500 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 FGFR1OPO95684 399 aaKnown RBP21.58■■□□□ 1.05
CD47-202ENST00000361309 PLA2G2AP14555 144 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 CLCN6P51797 869 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 GABREP78334 506 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 TMEM259Q4ZIN3 620 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 BRMS1LQ5PSV4 323 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 C22orf39Q6P5X5 142 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 PTAR1Q7Z6K3 402 aaPredicted RBP21.58■■□□□ 1.05
CD47-202ENST00000361309 ZNF605Q86T29 641 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 SETD3Q86TU7 594 aaPredicted RBP21.58■■□□□ 1.05
CD47-202ENST00000361309 DCAF4L2Q8NA75 395 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 ZNF397Q8NF99 534 aaPredicted RBP21.58■■□□□ 1.05
CD47-202ENST00000361309 IFT43Q96FT9 208 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 HIC2Q96JB3 615 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 NPY6RQ99463 290 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 OSBPL2Q9H1P3 480 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 SYNCQ9H7C4 482 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 U3KQA8 63 aa21.58■■□□□ 1.05
CD47-202ENST00000361309 NEMP2A6NFY4 417 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 A6NNZ2 444 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 SCAMP1O15126 338 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 CSO75390 466 aaKnown RBP21.57■■□□□ 1.04
CD47-202ENST00000361309 LEFTY1O75610 366 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 NEBLO76041 1014 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 GP1BAP07359 652 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 RECQLP46063 649 aaPredicted RBP21.57■■□□□ 1.04
CD47-202ENST00000361309 CXCR3P49682 368 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 SNX16P57768 344 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 RNASE9P60153 205 aaKnown RBP21.57■■□□□ 1.04
CD47-202ENST00000361309 PTK2Q05397 1052 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 GBP6Q6ZN66 633 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 DPY19L3Q6ZPD9 716 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 TFAP2DQ7Z6R9 452 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 FAM181AQ8N9Y4 354 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 BMFQ96LC9 184 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 ABCG4Q9H172 646 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 PLCB1Q9NQ66 1216 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 RRN3Q9NYV6 651 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.57■■□□□ 1.04
CD47-202ENST00000361309 MPP6Q9NZW5 540 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 HS3ST3A1Q9Y663 406 aa21.57■■□□□ 1.04
CD47-202ENST00000361309 CHD5Q8TDI0 1954 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 DRGXA6NNA5 263 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 K7ESM1 405 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 KRT9P35527 623 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 SULT1E1P49888 294 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 DUSP3P51452 185 aaPredicted RBP21.56■■□□□ 1.04
CD47-202ENST00000361309 HNRNPKP61978 463 aaKnown RBP eCLIP21.56■■□□□ 1.04
CD47-202ENST00000361309 CFHR1Q03591 330 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 MAPK8IP2Q13387 824 aaPredicted RBP21.56■■□□□ 1.04
CD47-202ENST00000361309 FGL2Q14314 439 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 BROXQ5VW32 411 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 DCP2Q8IU60 420 aaKnown RBP21.56■■□□□ 1.04
CD47-202ENST00000361309 LSMEM2Q8N112 164 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 OR7D4Q8NG98 312 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 FAM174AQ8TBP5 190 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 PPP1R16AQ96I34 528 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 DUSP23Q9BVJ7 150 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 SLC17A9Q9BYT1 436 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 TMPRSS4Q9NRS4 437 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 AJAP1Q9UKB5 411 aaPredicted RBP21.56■■□□□ 1.04
CD47-202ENST00000361309 WASF2Q9Y6W5 498 aa21.56■■□□□ 1.04
CD47-202ENST00000361309 POM121BA6NF01 834 aa21.55■■□□□ 1.04
CD47-202ENST00000361309 ERVH48-1M5A8F1 160 aa21.55■■□□□ 1.04
CD47-202ENST00000361309 ZNF821O75541 412 aaPredicted RBP21.55■■□□□ 1.04
CD47-202ENST00000361309 DXOO77932 396 aaKnown RBP21.55■■□□□ 1.04
CD47-202ENST00000361309 PAK4O96013 591 aaPredicted RBP21.55■■□□□ 1.04
CD47-202ENST00000361309 PON1P27169 355 aa21.55■■□□□ 1.04
CD47-202ENST00000361309 OR1E1P30953 314 aa21.55■■□□□ 1.04
CD47-202ENST00000361309 LSSP48449 732 aa21.55■■□□□ 1.04
CD47-202ENST00000361309 NEK3P51956 506 aa21.55■■□□□ 1.04
CD47-202ENST00000361309 TMPRSS3P57727 454 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms