RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PFKPQ01813 784 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ZNF655Q8N720 491 aaPredicted RBP18.6■□□□□ 0.57
SHANK1-202ENST00000359082 CHST7Q9NS84 486 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 NTRK1P04629 796 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ADRA1DP25100 572 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 SERPINA4P29622 427 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 BPIFB6Q8NFQ5 453 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ABCC13Q9NSE7 274 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 PIK3CGP48736 1102 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 POLR2LP62875 67 aaKnown RBP18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ERVK-9P63128 1117 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 MTAPQ13126 283 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 INO80DQ53TQ3 878 aaPredicted RBP18.6■□□□□ 0.57
SHANK1-202ENST00000359082 RAP1GAP2Q684P5 730 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 OR52L1Q8NGH7 329 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 REXO5Q96IC2 774 aaKnown RBP18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ZNHIT2Q9UHR6 403 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 IDH3BO43837 385 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 PAEPP09466 180 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 UQCRBP14927 111 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ARMC8Q8IUR7 673 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 HOMEZQ8IX15 550 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ZCCHC9Q8N567 271 aaKnown RBP18.6■□□□□ 0.57
SHANK1-202ENST00000359082 PPP1R13LQ8WUF5 828 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 C1QTNF7Q9BXJ2 289 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 PNMA8CA0A1B0GUJ8 204 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 CCDC189A1A4V9 331 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 IL1R1P14778 569 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 ABL2P42684 1182 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 CDK7P50613 346 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 RHAGQ02094 409 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 ADHFE1Q8IWW8 467 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 RIOX1Q9H6W3 641 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PCDH12Q9NPG4 1184 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 MRPL17Q9NRX2 175 aaKnown RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 ZMPSTE24O75844 475 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 SP100P23497 879 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 CYP4F2P78329 520 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 CYP4F3Q08477 520 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 RBBP4Q09028 425 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PARP6Q2NL67 630 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 C15orf59Q2T9L4 293 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PEG10Q86TG7 708 aaKnown RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 BRSK2Q8IWQ3 736 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 EFCAB3Q8N7B9 438 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PPP1R16AQ96I34 528 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PTPRMP28827 1452 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 TRDMT1O14717 391 aaKnown RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 FFAR3O14843 346 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 GPR42O15529 346 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 LTA4HP09960 611 aaKnown RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 AXLP30530 894 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 ITGADQ13349 1161 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 ZIK1Q3SY52 487 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 IKBIPQ70UQ0 350 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 LRRN4CLQ8ND94 238 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 MAT2BQ9NZL9 334 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 CASZ1Q86V15 1759 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PIK3C2BO00750 1634 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 KHDRBS3O75525 346 aaKnown RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 KDELR1P24390 212 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 BEX3Q00994 111 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 TCEAL5Q5H9L2 206 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 RGL4Q8IZJ4 473 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 SUSD6Q92537 303 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 MAML3Q96JK9 1138 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 NDNQ99608 321 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 SNX6Q9UNH7 406 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 F8VP50 259 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 KRT33AO76009 404 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PSMG1O95456 288 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 PRG2P13727 222 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 IDH2P48735 452 aaKnown RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 RARRES1P49788 294 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 CDC42P60953 191 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 SEC23AQ15436 765 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 ZNHIT3Q15649 155 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 TAB1Q15750 504 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 DSELQ8IZU8 1212 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-202ENST00000359082 TMEM216Q9P0N5 145 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 FZD1Q9UP38 647 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 NFASCO94856 1347 aa18.59■□□□□ 0.57
SHANK1-202ENST00000359082 NDUFS2O75306 463 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 GUCY1B2O75343 617 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 AMD1P17707 334 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 KYAT3Q6YP21 454 aaKnown RBP18.58■□□□□ 0.57
SHANK1-202ENST00000359082 MMADHCQ9H3L0 296 aaPredicted RBP18.58■□□□□ 0.57
SHANK1-202ENST00000359082 EPB41L1Q9H4G0 881 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 GSTK1Q9Y2Q3 226 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 OTOP1Q7RTM1 612 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 ARHGAP22Q7Z5H3 698 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 SKA1Q96BD8 255 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 BTRCQ9Y297 605 aa18.58■□□□□ 0.57
SHANK1-202ENST00000359082 CCNA2P20248 432 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 SLC12A3P55017 1021 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.56
SHANK1-202ENST00000359082 PSTKQ8IV42 348 aaKnown RBP18.58■□□□□ 0.56
SHANK1-202ENST00000359082 STK40Q8N2I9 435 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 ABCG8Q9H221 673 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms