RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 AIF1P55008 147 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 NME5P56597 212 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 WNT3AP56704 352 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 PRKAA1Q13131 559 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 FLOT2Q14254 428 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 KCNA10Q16322 511 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 CYP4V2Q6ZWL3 525 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 KCTD13Q8WZ19 329 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 DHRS4Q9BTZ2 278 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 Q9H521 79 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 AGO3Q9H9G7 860 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 IL1RL2Q9HB29 575 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ENTPD7Q9NQZ7 604 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 NUP205Q92621 2012 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ENO4A6NNW6 628 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 GABBR2O75899 941 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 TSPAN8P19075 237 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 GRK4P32298 578 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ETV4P43268 484 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 CSE1LP55060 971 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 GRIK3Q13003 919 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 KRT72Q14CN4 511 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 PSMD5Q16401 504 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ZNF781Q8N8C0 355 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 SKA2Q8WVK7 121 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 RTP4Q96DX8 246 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 MRPL1Q9BYD6 325 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 EIF2B3Q9NR50 452 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 TBC1D13Q9NVG8 400 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 MARCH2Q9P0N8 246 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 NME7Q9Y5B8 376 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 SCN1AP35498 2009 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 SIN3BO75182 1162 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 USP1O94782 785 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ZNF865P0CJ78 1059 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 T-ENOLP0DO92 83 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 YWHAQP27348 245 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 MSX2P35548 267 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 ZNF135P52742 658 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 PKNOX1P55347 436 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 MRPS35P82673 323 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 PPIDQ08752 370 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 CYLC2Q14093 348 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 ASRGL1Q7L266 308 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 TAS2R42Q7RTR8 314 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ICA1LQ8NDH6 482 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 NTAN1Q96AB6 310 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 TMEM209Q96SK2 561 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ACBD6Q9BR61 282 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 GATA5Q9BWX5 397 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 EML4Q9HC35 981 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 HNRNPLP14866 589 aaKnown RBP eCLIP11.35□□□□□ -0.59
SSU72-202ENST00000359060 LRPAP1P30533 357 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 RPL14P50914 215 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 POLD3Q15054 466 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 PAFAH1B3Q15102 231 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 LDB1Q86U70 411 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 TREML1Q86YW5 311 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 CENPIQ92674 756 aaPredicted RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 MOCOSQ96EN8 888 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 TSC22D3Q99576 134 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 RHOJQ9H4E5 214 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 FBXO44Q9H4M3 255 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 POMKQ9H5K3 350 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 NMRK1Q9NWW6 199 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 GTF2IRD1Q9UHL9 959 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 GNEQ9Y223 722 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 FGF10O15520 208 aaPredicted RBP11.34□□□□□ -0.59
SSU72-202ENST00000359060 NDUFS3O75489 264 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 WFS1O76024 890 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 CYP2C18P33260 490 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 SCNN1BP51168 640 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 PKN3Q6P5Z2 889 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 C16orf89Q6UX73 402 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 ARHGAP36Q6ZRI8 547 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 GALNT4Q8N4A0 578 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 NPWQ8N729 165 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 RAB3IL1Q8TBN0 382 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 WDR60Q8WVS4 1066 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 FCRL3Q96P31 734 aaPredicted RBP11.34□□□□□ -0.59
SSU72-202ENST00000359060 PPP1R2P1Q96PQ5 205 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 NMRK2Q9NPI5 230 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 MOCS1Q9NZB8 636 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 SIRPGQ9P1W8 387 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 PCDHB7Q9Y5E2 793 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 WASF2Q9Y6W5 498 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 TYW5A2RUC4 315 aaKnown RBP11.34□□□□□ -0.59
SSU72-202ENST00000359060 CCDC166P0CW27 439 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 HADHAP40939 763 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 CRHR2Q13324 411 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 MED21Q13503 144 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 WLSQ5T9L3 541 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 ZNF280DQ6N043 979 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 LRRC8EQ6NSJ5 796 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms