RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 COG4Q9H9E3 785 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 PEX11AO75192 247 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 MPSTP25325 297 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 GHRHRQ02643 423 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 DMPKQ09013 629 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 PRKD1Q15139 912 aaPredicted RBP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ZRANB3Q5FWF4 1079 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ATP6V0D2Q8N8Y2 350 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 PPP2R3CQ969Q6 453 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 BRD8Q9H0E9 1235 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ING2Q9H160 280 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 MUC3BQ9H195 1237 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 COPS7BQ9H9Q2 264 aaPredicted RBP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 TRPC7Q9HCX4 862 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 CNGB3Q9NQW8 809 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ZNF229Q9UJW7 825 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 DERAQ9Y315 318 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 SLCO1B7G3V0H7 640 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 NR5A2O00482 541 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 SLC2A3P11169 496 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 OCA2Q04671 838 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 PPIDQ08752 370 aaKnown RBP12.44□□□□□ -0.42
COL20A1-201ENST00000358894 IMPG1Q17R60 797 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 TMEM86AQ8N2M4 240 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 ZBTB18Q99592 522 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 FAM105AQ9NUU6 356 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 CD274Q9NZQ7 290 aa12.44□□□□□ -0.42
COL20A1-201ENST00000358894 COL1A2P08123 1366 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 ATP6AP2A0A1C7CYW4 349 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 HDAC3O15379 428 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 ATP6AP2O75787 350 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 IQCF3P0C7M6 154 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 MLNP12872 115 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 RENBPP51606 427 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 SLC18A1P54219 525 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 ATP1A4Q13733 1029 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 FUT11Q495W5 492 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TEX44Q53QW1 395 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 PCID2Q5JVF3 399 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 HPS6Q86YV9 775 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 DIS3LQ8TF46 1054 aaKnown RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 SLC35F5Q8WV83 523 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 SORCS3Q9UPU3 1222 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TRPV2Q9Y5S1 764 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 LAMB2P55268 1798 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 SIN3BO75182 1162 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 E2F6O75461 281 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 PIRTP0C851 137 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 CRYBB1P53674 252 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TBX4P57082 545 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TOP6BLQ8N6T0 577 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 OR6Y1Q8NGX8 325 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 MAML3Q96JK9 1138 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 CNDP1Q96KN2 507 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 DDX28Q9NUL7 540 aaKnown RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TMA7Q9Y2S6 64 aaKnown RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 IGKV6D-21A0A0A0MT36 114 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 SMIM35A0A1B0GVV1 85 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TK2O00142 265 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 LRIG2O94898 1065 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 KRT75O95678 551 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 MT-CYBP00156 380 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 RBP1P09455 135 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 ZBTB48P10074 688 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 SP100P23497 879 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 MAP4P27816 1152 aaKnown RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 PLOD1Q02809 727 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 RALGPS1Q5JS13 557 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 NCBP2-AS2Q69YL0 99 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 FSTL4Q6MZW2 842 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 DENND1AQ8TEH3 1009 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 RCN3Q96D15 328 aa12.43□□□□□ -0.42
COL20A1-201ENST00000358894 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-201ENST00000358894 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 TM7SF2O76062 418 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CCDC166P0CW27 439 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 AKR1A1P14550 325 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ME2P23368 584 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CLCNKBP51801 687 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CSE1LP55060 971 aaKnown RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 MOGSQ13724 837 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 KRT72Q14CN4 511 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 LPCAT4Q643R3 524 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 HFE2Q6ZVN8 426 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CAND1Q86VP6 1230 aaKnown RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 PCED1BQ96HM7 432 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 GRIP2Q9C0E4 1043 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 LATS2Q9NRM7 1088 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 RGS18Q9NS28 235 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 DNAAF2Q9NVR5 837 aaKnown RBP12.42□□□□□ -0.42
COL20A1-201ENST00000358894 CDH9Q9ULB4 789 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 ADAMTS5Q9UNA0 930 aa12.42□□□□□ -0.42
COL20A1-201ENST00000358894 RPL26L1Q9UNX3 145 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms