RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CHRNA4P43681 627 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 PLK1P53350 603 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 PCSK7Q16549 785 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 MMEL1Q495T6 779 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 FSCBQ5H9T9 825 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 KCTD11Q693B1 232 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 TMC7Q7Z402 723 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 CEP97Q8IW35 865 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 NXNL1Q96CM4 212 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 IFT43Q96FT9 208 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 MSI1O43347 362 aaKnown RBP20.78■□□□□ 0.92
COL13A1-202ENST00000357811 HNRNPLP14866 589 aaKnown RBP eCLIP20.78■□□□□ 0.92
COL13A1-202ENST00000357811 KCNE1P15382 129 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 CCL14Q16627 93 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 TAC4Q86UU9 113 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 PDSS2Q86YH6 399 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 TMA16Q96EY4 203 aaKnown RBP20.78■□□□□ 0.92
COL13A1-202ENST00000357811 KLHL4Q9C0H6 718 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 NDFIP2Q9NV92 336 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 OXSMQ9NWU1 459 aa20.78■□□□□ 0.92
COL13A1-202ENST00000357811 SF3B1O75533 1304 aaKnown RBP eCLIP20.78■□□□□ 0.92
COL13A1-202ENST00000357811 SMIM35A0A1B0GVV1 85 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 F2P00734 622 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 THOP1P52888 689 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 NAB1Q13506 487 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 SEL1L3Q68CR1 1132 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 ZC3HC1Q86WB0 502 aaKnown RBP20.77■□□□□ 0.92
COL13A1-202ENST00000357811 NDNQ99608 321 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 STN1Q9H668 368 aaKnown RBP20.77■□□□□ 0.92
COL13A1-202ENST00000357811 CPA4Q9UI42 421 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 PCDHGB4Q9UN71 923 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 PCDHGB5Q9Y5G0 923 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 CNGA3Q16281 694 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 ARL13BQ3SXY8 428 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 CLEC14AQ86T13 490 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 MFSD6LQ8IWD5 586 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 TOP6BLQ8N6T0 577 aa20.77■□□□□ 0.92
COL13A1-202ENST00000357811 ALOX15P16050 662 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-202ENST00000357811 XRCC1P18887 633 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-202ENST00000357811 SEMA3BQ13214 749 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 MED21Q13503 144 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 PPP2R3CQ969Q6 453 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 TEKT5Q96M29 485 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 TSNARE1Q96NA8 513 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 EPAS1Q99814 870 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 FICDQ9BVA6 458 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 CHST12Q9NRB3 414 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 FLRT1Q9NZU1 646 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 SFMBT1Q9UHJ3 866 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 ZSWIM8A7E2V4 1837 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 MYOCOSA0A1B0GUC4 107 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 CCL22O00626 93 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 TIMM44O43615 452 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 STRNO43815 780 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 PGM3O95394 542 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 SLC35E2BP0CK96 405 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 PGFP49763 221 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 CDK7P50613 346 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 SCNN1GP51170 649 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 BNIPLQ7Z465 357 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 DSELQ8IZU8 1212 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 NPAS2Q99743 824 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 C9IYK1 514 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 MPOP05164 745 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 VCLP18206 1134 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 MAGEA12P43365 314 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 RPL14P50914 215 aaKnown RBP20.76■□□□□ 0.91
COL13A1-202ENST00000357811 GJA9P57773 515 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 CACNB2Q08289 660 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-202ENST00000357811 ANO4Q32M45 955 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 ZSCAN18Q8TBC5 510 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-202ENST00000357811 SREK1Q8WXA9 508 aaKnown RBP20.76■□□□□ 0.91
COL13A1-202ENST00000357811 TMEM209Q96SK2 561 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 TLL2Q9Y6L7 1015 aa20.76■□□□□ 0.91
COL13A1-202ENST00000357811 TTC24A2A3L6 582 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-202ENST00000357811 H3BNX3 289 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 MATN2O00339 956 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 TSPAN8P19075 237 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 CDH17Q12864 832 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 DBN1Q16643 649 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 IQSEC1Q6DN90 963 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 SMYD5Q6GMV2 418 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 FBXL19Q6PCT2 694 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 CENPLQ8N0S6 344 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-202ENST00000357811 KCTD13Q8WZ19 329 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 MS4A4AQ96JQ5 239 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 IL22Q9GZX6 179 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 GTSE1Q9NYZ3 720 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 ADAM28Q9UKQ2 775 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 SBF1O95248 1867 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 ANKRD33BA6NCL7 494 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 HDAC3O15379 428 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 GRID2O43424 1007 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 DLX3O60479 287 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 POMCP01189 267 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 ATP5BP06576 529 aaKnown RBP20.75■□□□□ 0.91
COL13A1-202ENST00000357811 HDCP19113 662 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 BRCC3P46736 316 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 PSEN2P49810 448 aa20.75■□□□□ 0.91
COL13A1-202ENST00000357811 MTTPP55157 894 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms