RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RNASEH2BQ5TBB1 312 aaKnown RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 LYSMD4Q5XG99 296 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SLC9A4Q6AI14 798 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CLEC18BQ6UXF7 455 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 LRRC69Q6ZNQ3 347 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SPACA3Q8IXA5 215 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 TCEAL8Q8IYN2 117 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 FUKQ8N0W3 1084 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CLEC18CQ8NCF0 446 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 TSTD1Q8NFU3 115 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SNIP1Q8TAD8 396 aaKnown RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 SLC2A14Q8TDB8 520 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 E2F7Q96AV8 911 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 MED8Q96G25 268 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SENP8Q96LD8 212 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CFAP57Q96MR6 1250 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 TTC25Q96NG3 672 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SERPINB12Q96P63 405 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 PSMG3-AS1Q96PY0 264 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 DUSP16Q9BY84 665 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 PPCSQ9HAB8 311 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.45□□□□□ -1.06
CD44-205ENST00000352818 RCOR3Q9P2K3 495 aaPredicted RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 CDH9Q9ULB4 789 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 TPX2Q9ULW0 747 aaKnown RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 FARP1Q9Y4F1 1045 aaPredicted RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 INSL5Q9Y5Q6 135 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 BACE2Q9Y5Z0 518 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CENPEQ02224 2701 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SPTBN1Q01082 2364 aaKnown RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 HCRTO43612 131 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 ZNF189O75820 626 aaPredicted RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 CD48P09326 243 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 PDGFRBP09619 1106 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 FAM200BP0CF97 657 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 ODC1P11926 461 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 HLA-EP13747 358 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 TSHRP16473 764 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 ZFXP17010 805 aaPredicted RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 PCSK1P29120 753 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 ADORA2BP29275 332 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 STIP1P31948 543 aaKnown RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 MDH1P40925 334 aaKnown RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 CDR1P51861 262 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 HDAC4P56524 1084 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 CLDN6P56747 220 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 GNGT1P63211 74 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 RHDQ02161 417 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 SEMG2Q02383 582 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 SERINC3Q13530 473 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 UBAP2LQ14157 1087 aaKnown RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 KRT81Q14533 505 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 TRIP13Q15645 432 aaPredicted RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 UPP1Q16831 310 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 C15orf59Q2T9L4 293 aaPredicted RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 P3H1Q32P28 736 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 RAB41Q5JT25 222 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 KCNT1Q5JUK3 1230 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 ERMARDQ5T6L9 678 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 WSCD1Q658N2 575 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 KCTD16Q68DU8 428 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 TRIM68Q6AZZ1 485 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 C4orf22Q6V702 233 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 ZNF574Q6ZN55 896 aaPredicted RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 PAQR9Q6ZVX9 377 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 RFX6Q8HWS3 928 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 PPIL6Q8IXY8 311 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 SCML4Q8N228 414 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 RIBC1Q8N443 379 aaPredicted RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 DEFB119Q8N690 84 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 ZNF461Q8TAF7 563 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 RIN3Q8TB24 985 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 HSPH1Q92598 858 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 PRCCQ92733 491 aaPredicted RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 NT5C3BQ969T7 300 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 CENPTQ96BT3 561 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 RNF157Q96PX1 679 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 SLC2A13Q96QE2 648 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 SYT15Q9BQS2 421 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 SNRNP25Q9BV90 132 aaKnown RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 CALN1Q9BXU9 219 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 PCDH18Q9HCL0 1135 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 PNPLA8Q9NP80 782 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 DDX43Q9NXZ2 648 aaKnown RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.44□□□□□ -1.06
CD44-205ENST00000352818 NINJ2Q9NZG7 142 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 LGALS13Q9UHV8 139 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 DSEQ9UL01 958 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 PTPRDP23468 1912 aa8.44□□□□□ -1.06
CD44-205ENST00000352818 HELZP42694 1942 aaKnown RBP8.44□□□□□ -1.06
CD44-205ENST00000352818 OTOGQ6ZRI0 2925 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 E7ESA3 106 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 E9PAM4 449 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 M0QZQ0 153 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 SGK1O00141 431 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 APOL1O14791 398 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 RASGRF2O14827 1237 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms