RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TFEBP19484 476 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 GJA9P57773 515 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 MRPS22P82650 360 aaKnown RBP24.92■■□□□ 1.58
CPNE1-202ENST00000352393 CEACAM7Q14002 265 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 PCBP1Q15365 356 aaKnown RBP eCLIP24.92■■□□□ 1.581e-8■■■■■ 43
CPNE1-202ENST00000352393 FASTKD5Q7L8L6 764 aaKnown RBP24.92■■□□□ 1.58
CPNE1-202ENST00000352393 LSMEM2Q8N112 164 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 DPF3Q92784 378 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 VAT1Q99536 393 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 ZDHHC2Q9UIJ5 367 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 FBXW11Q9UKB1 542 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 CDYLQ9Y232 598 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 KLHL33A6NCF5 533 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 SLCO1B7G3V0H7 640 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 GOLGA8TH3BQL2 631 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 PHGDHO43175 533 aaKnown RBP24.92■■□□□ 1.58
CPNE1-202ENST00000352393 TPH1P17752 444 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 PTPN1P18031 435 aaKnown RBP24.92■■□□□ 1.58
CPNE1-202ENST00000352393 DCPSQ96C86 337 aaKnown RBP24.92■■□□□ 1.58
CPNE1-202ENST00000352393 NDUFA13Q9P0J0 144 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 RAB26Q9ULW5 256 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 G3BP2Q9UN86 482 aaKnown RBP24.92■■□□□ 1.58
CPNE1-202ENST00000352393 JUNP05412 331 aaKnown RBP24.91■■□□□ 1.58
CPNE1-202ENST00000352393 NAGLUP54802 743 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 LILRA4P59901 499 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 CDH17Q12864 832 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 CENPLQ8N0S6 344 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-202ENST00000352393 KCTD4Q8WVF5 259 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 TEKT5Q96M29 485 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 TSNARE1Q96NA8 513 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 CATSPER2Q96P56 530 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 KIFC1Q9BW19 673 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 ULBP1Q9BZM6 244 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 RNF39Q9H2S5 420 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 Q9H521 79 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 ZBTB26Q9HCK0 441 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 NUP205Q92621 2012 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 TADA2AO75478 443 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 DDHD2O94830 711 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 DNAJB1P25685 340 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 PMLP29590 882 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 DPP6P42658 865 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 DAOAP59103 153 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 RFTN1Q14699 578 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-202ENST00000352393 TMEM198Q66K66 360 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 KLHDC8BQ8IXV7 354 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 CATSPER1Q8NEC5 780 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 LRGUKQ96M69 825 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 TSPAN18Q96SJ8 248 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 UBAP1Q9NZ09 502 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 BCAP29Q9UHQ4 241 aa24.91■■□□□ 1.58
CPNE1-202ENST00000352393 RRN3P2A6NIE6 340 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 YJEFN3A6XGL0 299 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 GLRBP48167 497 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 PGGT1BP53609 377 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 CDC42EP1Q00587 391 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 SLC12A1Q13621 1099 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 USP10Q14694 798 aaKnown RBP24.9■■□□□ 1.58
CPNE1-202ENST00000352393 CNGA3Q16281 694 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 LRRC8EQ6NSJ5 796 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 ZSCAN18Q8TBC5 510 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-202ENST00000352393 DLG3Q92796 817 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 PGAP3Q96FM1 320 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-202ENST00000352393 SCYL1Q96KG9 808 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 PRICKLE1Q96MT3 831 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-202ENST00000352393 APBA2Q99767 749 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 WDR41Q9HAD4 459 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 MYLKQ15746 1914 aa24.9■■□□□ 1.58
CPNE1-202ENST00000352393 CRTAMO95727 393 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 SNAI1O95863 264 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-202ENST00000352393 CAPNS1P04632 268 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 COL6A2P12110 1019 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 SMPD1P17405 629 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 GABRB3P28472 473 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 AXLP30530 894 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 RPS6KA3P51812 740 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 PKNOX1P55347 436 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 SH3BGRP55822 239 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-202ENST00000352393 MAP3K7CLP57077 242 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 MS4A2Q01362 244 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 NAPEPLDQ6IQ20 393 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 LILRA2Q8N149 483 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 FSTL5Q8N475 847 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-202ENST00000352393 ADCY4Q8NFM4 1077 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 OPTNQ96CV9 577 aa24.89■■□□□ 1.58
CPNE1-202ENST00000352393 PIN4Q9Y237 131 aaKnown RBP24.89■■□□□ 1.58
CPNE1-202ENST00000352393 A0A1B0GVG6 124 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 PRSS51A0A1B0GVH4 220 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 AP3B1O00203 1094 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 OR6B1O95007 311 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 FAM200BP0CF97 657 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 CLCN2P51788 898 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 UBXN11Q5T124 520 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 KIAA0319Q5VV43 1072 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 SPATA24Q86W54 205 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 BHLHE22Q8NFJ8 381 aaPredicted RBP24.89■■□□□ 1.57
CPNE1-202ENST00000352393 MED10Q9BTT4 135 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 UBP1Q9NZI7 540 aa24.89■■□□□ 1.57
CPNE1-202ENST00000352393 RUVBL2Q9Y230 463 aaKnown RBP24.89■■□□□ 1.57
CPNE1-202ENST00000352393 DLX3O60479 287 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms