RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 NEU3Q9UQ49 428 aa21.68■■□□□ 1.06
PTPN18-202ENST00000347849 SF3B1O75533 1304 aaKnown RBP eCLIP21.68■■□□□ 1.06
PTPN18-202ENST00000347849 COL4A4P53420 1690 aaPredicted RBP21.68■■□□□ 1.06
PTPN18-202ENST00000347849 NT5C1B-RDH14C9J2C7 533 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 OPHN1O60890 802 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 TADA2AO75478 443 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 PTPN3P26045 913 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 USP46P62068 366 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 LAMB3Q13751 1172 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 AAGABQ6PD74 315 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 C4orf22Q6V702 233 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 PID1Q7Z2X4 250 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 DHDDSQ86SQ9 333 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 FAM126BQ8IXS8 530 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 ATAD1Q8NBU5 361 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 SLAIN1Q8ND83 568 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 PIWIL2Q8TC59 973 aaKnown RBP21.67■■□□□ 1.06
PTPN18-202ENST00000347849 ZNF778Q96MU6 729 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 EBNA1BP2Q99848 306 aaKnown RBP21.67■■□□□ 1.06
PTPN18-202ENST00000347849 CENPKQ9BS16 269 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 FRMD8Q9BZ67 464 aaPredicted RBP21.67■■□□□ 1.06
PTPN18-202ENST00000347849 UNC93B1Q9H1C4 597 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 MKS1Q9NXB0 559 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 RRN3Q9NYV6 651 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 A0A1W2PQH9 124 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 PDE5AO76074 875 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 ETS2P15036 469 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 DYNC1I2Q13409 638 aaKnown RBP21.67■■□□□ 1.06
PTPN18-202ENST00000347849 ARTNQ5T4W7 220 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 AGAP3Q96P47 875 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 TMEM161AQ9NX61 479 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 SLC17A6Q9P2U8 582 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 ADAMTS6Q9UKP5 1117 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 APOBEC2Q9Y235 224 aaKnown RBP21.67■■□□□ 1.06
PTPN18-202ENST00000347849 NUP205Q92621 2012 aa21.67■■□□□ 1.06
PTPN18-202ENST00000347849 WDR27A2RRH5 827 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 IRAK2O43187 625 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 USP12O75317 370 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 HCAR3P49019 387 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 SESN2P58004 480 aaPredicted RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 RPL10AP62906 217 aaKnown RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 ZBTB17Q13105 803 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 MED21Q13503 144 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 TUBB3Q13509 450 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 HNRNPDQ14103 355 aaKnown RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 SCML4Q8N228 414 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 APBB2Q92870 758 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 CCDC124Q96CT7 223 aaKnown RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 FAM193BQ96PV7 902 aaPredicted RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.66■■□□□ 1.063e-9■■■■□ 20.4
PTPN18-202ENST00000347849 PROCP04070 461 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 KCNA4P22459 653 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 FAM171A1Q5VUB5 890 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 BTBD8Q5XKL5 378 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 RSPO2Q6UXX9 243 aaPredicted RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 ARHGAP36Q6ZRI8 547 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 TMEM173Q86WV6 379 aaPredicted RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 ST13P4Q8IZP2 240 aaPredicted RBP21.66■■□□□ 1.06
PTPN18-202ENST00000347849 GSDMBQ8TAX9 411 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 SCLYQ96I15 445 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 EPAS1Q99814 870 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 CYP4F11Q9HBI6 524 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 SORCS3Q9UPU3 1222 aa21.66■■□□□ 1.06
PTPN18-202ENST00000347849 TMEM189-UBE2V1I3L0A0 370 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ATP5BP06576 529 aaKnown RBP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 SLC1A6P48664 564 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 APLP1P51693 650 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ARPP19P56211 112 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 RWDD4Q6NW29 188 aaKnown RBP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ACAD11Q709F0 780 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 MARK2Q7KZI7 788 aaKnown RBP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ADGRG6Q86SQ4 1221 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 EFCAB3Q8N7B9 438 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 CASD1Q96PB1 797 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 FAM159BA6NKW6 160 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ZBTB24O43167 697 aaPredicted RBP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 FKTNO75072 461 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 GSRP00390 522 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 MGAT1P26572 445 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 CD68P34810 354 aaPredicted RBP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 FDFT1P37268 417 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ARNTL2Q8WYA1 636 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 PRDM16Q9HAZ2 1276 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 ABCC13Q9NSE7 274 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 NDFIP2Q9NV92 336 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 IL1RAPL1Q9NZN1 696 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 KLHL8Q9P2G9 620 aaPredicted RBP21.65■■□□□ 1.06
PTPN18-202ENST00000347849 TRIM17Q9Y577 477 aa21.65■■□□□ 1.06
PTPN18-202ENST00000347849 LOC100653049A0A140TA62 436 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 SIN3BO75182 1162 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 PAGE1O75459 146 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 KRT34O76011 436 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 KLHL2O95198 593 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 PAX3P23760 479 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 COPAP53621 1224 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 AQP4P55087 323 aa21.64■■□□□ 1.05
PTPN18-202ENST00000347849 PPIDQ08752 370 aaKnown RBP21.64■■□□□ 1.05
PTPN18-202ENST00000347849 CCNIQ14094 377 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms