RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 NXNL1Q96CM4 212 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 B3GALT6Q96L58 329 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 TEKT5Q96M29 485 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 NDNQ99608 321 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 LRRC4Q9HBW1 653 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 C20orf96Q9NUD7 363 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-201ENST00000347613 CDH22Q9UJ99 828 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 CORO1CQ9ULV4 474 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-201ENST00000347613 CLEC11AQ9Y240 323 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 TANC1Q9C0D5 1861 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 CASP8AP2Q9UKL3 1982 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 GREB1Q4ZG55 1949 aa6.15□□□□□ -1.43
CLCN3-201ENST00000347613 A0A1B0GTL3 188 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 HACD1B0YJ81 288 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 DLX3O60479 287 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 MAFKO60675 156 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 TBX18O95935 607 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PEX11BO96011 259 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SERPINE1P05121 402 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 POLBP06746 335 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GLDCP23378 1020 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GP5P40197 560 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CRYBB1P53674 252 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 AQP4P55087 323 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 TPI1P60174 286 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 MAXP61244 160 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 USP46P62068 366 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 NSUN2Q08J23 767 aaKnown RBP eCLIP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 KYAT1Q16773 422 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PPP1R3AQ16821 1122 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 MUM1Q2TAK8 710 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 LSM12Q3MHD2 195 aaKnown RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ARL13AQ5H913 290 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SPRYD7Q5W111 196 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PM20D1Q6GTS8 502 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 RPAINQ86UA6 219 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ZC3HC1Q86WB0 502 aaKnown RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 LILRA2Q8N149 483 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SIX6OS1Q8N1H7 587 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 FSTL5Q8N475 847 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 KLHDC9Q8NEP7 349 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 VPS39Q96JC1 886 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 OLFM1Q99784 485 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 NUF2Q9BZD4 464 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 WWP1Q9H0M0 922 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GBA3Q9H227 469 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 EIF2B3Q9NR50 452 aaKnown RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 FAM105AQ9NUU6 356 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 POMPQ9Y244 141 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 KCTD3Q9Y597 815 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CHD9Q3L8U1 2897 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SCN10AQ9Y5Y9 1956 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 OR51F1A6NGY5 319 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SPECC1L-ADORA2AF8WAN1 911 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 DFFAO00273 331 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 NDC80O14777 642 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GLRA3O75311 464 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CD4P01730 458 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 HLA-DQB2P05538 268 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GSTA2P09210 222 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 FAM200BP0CF97 657 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 HNRNPLP14866 589 aaKnown RBP eCLIP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ZFXP17010 805 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SCNN1AP37088 669 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 NAGLUP54802 743 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GRIK3Q13003 919 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PDK1Q15118 436 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SV2CQ496J9 727 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 C1orf146Q5VVC0 180 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CNSTQ6PJW8 725 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 DQX1Q8TE96 717 aaKnown RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ANKRD49Q8WVL7 239 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 USP13Q92995 863 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 LRCH3Q96II8 777 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CDH19Q9H159 772 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 WDCPQ9H6R7 721 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 OXSMQ9NWU1 459 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 DCDC2Q9UHG0 476 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 A0A1B0GVG6 124 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GLTPD2A6NH11 291 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ARHGAP42A6NI28 874 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 RRN3P2A6NIE6 340 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 J3KR12 359 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 UBFD1O14562 309 aaKnown RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CNTN5O94779 1100 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 VAPBO95292 243 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 IGLV3-25P01717 112 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CD52P31358 61 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ACADSBP45954 432 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 GRIA4P48058 902 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SERPINB9P50453 376 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PKNOX1P55347 436 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 INHBEP58166 350 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CCNA1P78396 465 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 TIAL1Q01085 375 aaKnown RBP eCLIP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CACNB2Q08289 660 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 SCAPQ12770 1279 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 KLF10Q13118 480 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CNGA3Q16281 694 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms