RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RPL10AP62906 217 aaKnown RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ECT2LQ008S8 904 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 MS4A2Q01362 244 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CNTN2Q02246 1040 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF543Q08ER8 600 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 SLC12A1Q13621 1099 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 DPYSL3Q14195 570 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 KCNJ11Q14654 390 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 DLG2Q15700 870 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 PRR16Q569H4 304 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 TMTC4Q5T4D3 741 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CCNJQ5T5M9 372 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 N4BP2L1Q5TBK1 243 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ERAP2Q6P179 960 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 RSBN1LQ6PCB5 846 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 PADI6Q6TGC4 694 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CYS1Q717R9 158 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 UNC5BQ8IZJ1 945 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 SFRP1Q8N474 314 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 RDH13Q8NBN7 331 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ACTL9Q8TC94 416 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 DEPDC1BQ8WUY9 529 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 RCN3Q96D15 328 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 FAM84BQ96KN1 310 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CIB1Q99828 191 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 C11orf70Q9BRQ4 267 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 MTG1Q9BT17 334 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 UNC93B1Q9H1C4 597 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 VPS33BQ9H267 617 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 RUBCNLQ9H714 662 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 JMJD4Q9H9V9 463 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CYP26B1Q9NR63 512 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 FBXO8Q9NRD0 319 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 VAV3Q9UKW4 847 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CNOT6Q9ULM6 557 aaKnown RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 WBP11Q9Y2W2 641 aaKnown RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 TCAF1Q9Y4C2 921 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 A0A0C4DFX4 3053 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 C9IYK1 514 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 APOC4-APOC2K7ER74 178 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 GFRA3O60609 400 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ICMTO60725 284 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 PTTG1O95997 202 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 APOC2P02655 101 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 C1QAP02745 245 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CD40LGP29965 261 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CCND2P30279 289 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CAPGP40121 348 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 RAD23AP54725 363 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 YWHAZP63104 245 aaKnown RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 NOMO3P69849 1222 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ROR1Q01973 937 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 STX5Q13190 355 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 PEX6Q13608 980 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 BMPR2Q13873 1038 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 INPP5AQ14642 412 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 HADHQ16836 314 aaKnown RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 DGUOKQ16854 277 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 LRIT3Q3SXY7 679 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 SMYD5Q6GMV2 418 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CCSAPQ6IQ19 270 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 STYK1Q6J9G0 422 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 RFPL4BQ6ZWI9 263 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 SLC51BQ86UW2 128 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CCDC28AQ8IWP9 274 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ADGRF4Q8IZF3 695 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 TOR1AIP2Q8NFQ8 470 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 GRIN3AQ8TCU5 1115 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 HCAR2Q8TDS4 363 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 CPA5Q8WXQ8 436 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 VPS33AQ96AX1 596 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 GLT1D1Q96MS3 346 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 SEMA6AQ9H2E6 1030 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 SLA2Q9H6Q3 261 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 POPDC2Q9HBU9 364 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 ZFYVE28Q9HCC9 887 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 PRDM6Q9NQX0 595 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 C20orf96Q9NUD7 363 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-201ENST00000343524 PNPOQ9NVS9 261 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 SMOXQ9NWM0 555 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 FOCADQ5VW36 1801 aa8.25□□□□□ -1.09
ATG4A-201ENST00000343524 MTSS1O43312 755 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 GAS2O43903 313 aaKnown RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 PIAS1O75925 651 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 MYCP01106 439 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 PRKCAP17252 672 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 IMPDH1P20839 514 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 FGFR3P22607 806 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 GSTM2P28161 218 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 HIBADHP31937 336 aaKnown RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 SREBF1P36956 1147 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 PKNOX1P55347 436 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 GABARAPL2P60520 117 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 GAD2Q05329 585 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 BFSP2Q13515 415 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 NEDD8Q15843 81 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 PPP6R3Q5H9R7 873 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 SAMD4BQ5PRF9 694 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms